KEGG   Campylobacter lari subsp. concheus LMG 11760: CONCH_1010
Entry
CONCH_1010        CDS       T03557                                 
Name
(GenBank) UvrD/REP family helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cll  Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03420  Nucleotide excision repair
cll03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONCH_1010
   03430 Mismatch repair
    CONCH_1010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cll03400]
    CONCH_1010
Enzymes [BR:cll01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CONCH_1010
DNA repair and recombination proteins [BR:cll03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CONCH_1010
   MMR (mismatch excision repair)
    Other MMR factors
     CONCH_1010
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 PcrA_UvrD_tudor AAA_12 AAA_11 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: AJC89417
Position
973488..975551
AA seq 687 aa
MSFFEGLNDNQKEAIMHIDGAMLILAGAGSGKTKTITTRLAYLIDHVGIPAQNTLTLTFT
NKAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDIDDKKKI
LKDLASENLQCSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIVHLYEQYEH
FLIQNNFMDFDDLLMLTNKILEDEQFAKEQSQKYAYITVDEYQDTNVLQYQILKKLCTSH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKTLICTKDKGEEITILQNDDEKIESFKVSREVSKLLNSGINPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSIHKIREKDDLLAMILA
LEEEFKIKEFYKDNPEGEDKLLNIDELYANLKDKITHGDYNGLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTRLEKSRFFGESNVIKKELTLDHQKNCYKKGDLIKHKIFGIGRVTGVSK
IGAEEKLTINFGGIERMIMSSFVEKVI
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgagtttttttgaaggtttaaatgataaccaaaaagaagctatcatgcatatcgatgga
gctatgctgatactagcaggcgcaggtagcggaaagactaaaaccattaccactagactt
gcttatttaatcgatcatgtaggtattcctgcgcaaaataccctcacactaacctttaca
aataaagctgctaatgtaatgaaaacaagagccttagcacttttacaagatcaaaatttg
cacaatccccttttatgcacttttcataaatttggcttgttatttttaagactttatagc
gaaagaattaatagagcaaataattttgtcattattgatatagatgataaaaagaaaata
ctaaaagatttagctagtgaaaatttacaatgctctttagcaagcataggtgcttatatt
tcaaattttaaaaatcaaagcaaaagcgctcaagaaatacgcaaagaattagaattttta
aaagatgaaaaaaataaaaattacgaagaaatcgttcatttatatgaacaatatgagcat
tttttaatccaaaataatttcatggattttgatgatttactcatgctaactaataaaatt
ttagaagatgaacaatttgcaaaagaacaaagtcaaaaatatgcctatataacagtagat
gagtatcaagataccaatgtcttgcaatatcaaattctaaaaaaactttgcacttctcat
gaaaatatttgcgtggtgggtgatgatgatcaaagtatctatggttggcgtggggctaaa
atagaaaatattttaaattttaaagagcaatttaacaatgtaaaattagtcaaactagag
caaaactaccgctcaactagcgctattttacaagctgcaaatgaacttatagagcacaat
agaaaaagactaggaaaaactttaatttgcaccaaagataagggcgaagaaattacaatt
ttacaaaatgatgatgaaaaaattgaaagttttaaggtttcaagagaagtttcaaaactt
ttaaactcagggattaatcctagtgaaatagccatactttatagagtaaatgctctatct
cgtgctcttgaagaagcttttagcaaagaaaaaattccttttaaattgctaagtggaatt
cgtttttatgaaagagctgagattaaagatattatttcttatttaagattactttcaaat
ttaaatgatgattattcttttaaacgcattatcaaccgtcctaaaagaaactttggtaat
gcaagtttagaaaagctagaaaattatgccaaagaaaatcatttgtccttatttgaaagt
ctatgtgctttgcaaggaagtggattttttagcaaaaaaacagacaaagaattggaaaaa
ttcatactaagcatacacaaaatcagagaaaaagatgatttgcttgcaatgattttagcc
ttagaagaagaatttaaaatcaaagaattttataaagataacccagaaggtgaagataaa
cttttaaacatagacgaactttatgctaatttaaaagataaaatcactcatggagattat
aatggcttagatgatattttaaatgaaatttctttactcaatgagcaagatggacttgat
aaagaaagtatttgtattatgagtattcatgcaagtaaaggacttgagtttgattatgtt
tttatcataggcttagaagaagggttttttccactcactagcgaatcaagcaatatagaa
gaagaaagaagacttgcttatgtagcaatcactagagccaagaaaaaactttatttaagc
tatgctaattctagattttataaaggaagtcgcacaagattagaaaaaagtagatttttt
ggcgagagtaatgtaatcaaaaaagaattaacactagatcatcaaaaaaattgctacaaa
aaaggcgatttaatcaaacataaaatttttggcataggcagagttactggggtaagtaaa
ataggagctgaagaaaaactcacgattaattttggaggcatagaaagaatgataatgtca
agttttgtggaaaaagtaatatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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