KEGG   Campylobacter lari RM16712: UPTC16712_0495
Entry
UPTC16712_0495    CDS       T03556                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
clm  Campylobacter lari RM16712
Pathway
clm00260  Glycine, serine and threonine metabolism
clm00460  Cyanoamino acid metabolism
clm00630  Glyoxylate and dicarboxylate metabolism
clm00670  One carbon pool by folate
clm00680  Methane metabolism
clm01100  Metabolic pathways
clm01110  Biosynthesis of secondary metabolites
clm01120  Microbial metabolism in diverse environments
clm01200  Carbon metabolism
clm01230  Biosynthesis of amino acids
clm01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:clm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    UPTC16712_0495 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    UPTC16712_0495 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    UPTC16712_0495 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    UPTC16712_0495 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    UPTC16712_0495 (glyA)
Enzymes [BR:clm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     UPTC16712_0495 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1 Beta_elim_lyase Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: AJD06025
Position
471265..472506
AA seq 413 aa
MLENFDKEIFDLTQKELARQCDGLEMIASENFTIPEVMEVMGSILTNKYAEGYPGKRYYG
GCEFVDEIETIAIERCKKLFNCNFANVQPSSGSQANQGVYMALLNPGDRILGMDLSHGGH
LTHGSKVSSSGKVYESFFYGVELDGRINYDKVREIAKEVKPKLIVCGASAYPRVIDFAKF
REIADDVGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMCNDEEI
AKKINSAIFPGIQGGPLMHVIAAKAVGFKYNLSDEWKIYAKQIIKNTATLAQVLIDRKYD
LVSGGTDNHLILLSFLNKEFSGKDADLALERAGITANKNTVPGETRSPFVTSGLRLGTAA
LTARGFKEEQIAIVANYIADILDDIQNTKLQEEIKVKLKDLASNFIIYERALF
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgttggaaaattttgataaagaaatttttgatttaacccaaaaggagctagcaagacaa
tgtgatggtcttgaaatgatagcaagcgaaaattttaccataccagaagttatggaggta
atgggtagcattttaacaaataaatatgcagaaggctatcctggtaaaagatattatggc
ggatgtgaatttgtagatgagattgaaacgattgctatagaaagatgtaaaaaacttttt
aattgtaattttgccaatgtgcaacctagttcaggttcacaagcaaatcaaggtgtgtat
atggcattattaaatcctggtgatagaattttgggtatggatttaagccatggaggacac
ttaactcatggttctaaagtaagttcttctggaaaagtatatgaaagctttttttatgga
gttgagcttgatggaagaattaattatgataaagttagagagatagcaaaagaagttaag
ccaaaacttattgtttgtggtgctagtgcttatcctagagtgattgattttgctaaattt
agagaaatagcagatgatgttggtgcgtacttatttgctgatattgcacatattgcaggt
ttggttgtagcaggtgagcatcctagtccattcccttatgctcatgttgtaagttctact
acacataaaactttaagaggtccaagaggcgggattattatgtgtaatgatgaagaaatt
gccaaaaaaatcaattctgcaattttcccaggtattcaaggtggtccactaatgcatgta
attgctgctaaggcagttgggtttaaatataatttaagcgatgagtggaaaatttatgct
aagcaaatcattaaaaatactgctactttggcacaagttttaatagatagaaaatatgat
ttagttagcggtggtactgataatcatttgattttattaagttttttaaataaagaattt
agcggtaaagatgcagatttagcactagaaagagcaggtattacagctaataaaaatact
gttccaggtgaaactagaagtccttttgtgacgagtggcttaagacttggaacagcggct
ttaacagcaagaggctttaaagaagagcaaattgctattgttgcaaattatatagctgat
attttagatgatatacaaaatactaaattacaagaggagatcaaggttaaactaaaggat
ttagcaagtaattttattatttacgaaagggctttattttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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