KEGG   Campylobacter lari RM16712: UPTC16712_0968
Entry
UPTC16712_0968    CDS       T03556                                 
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
clm  Campylobacter lari RM16712
Brite
KEGG Orthology (KO) [BR:clm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clm03016]
    UPTC16712_0968 (trmA)
Enzymes [BR:clm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     UPTC16712_0968 (trmA)
Transfer RNA biogenesis [BR:clm03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    UPTC16712_0968 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_15 Methyltransf_25 Methyltransf_4 MTS Methyltransf_12 Methyltransf_11 Met_10 Cons_hypoth95 DREV Phospholip_A2_4 Methyltransf_23
Other DBs
NCBI-ProteinID: AJD06475
Position
complement(956166..957206)
AA seq 346 aa
MHFEEKIALNKALFSSLYNEEIQCFKSPLKAYRTRAEFSIYHHENGEISYAMFENKKKNP
IEKFDIADEKIQKHMPILLNNLSENLKHKLFGVEFLATKLDLSITLLFHKNIELIAQDLQ
ELAEKLNLKLIARSRGKKLVFNGENLRQALKINTNEFLYEFNNDCFIQPNTFINEKMIEW
VISCIGSDFKQDLLELYCGYGNFTIALARNFNKVLATEISKKNIEFALKNCVLNSIENIA
FTRLSSEELSQALKKEREFNRLKGIDLDSFKISHVLVDPPRAGLDLSVIELIKNYENIIY
ISCNPITLKENLEILCQSHEILNLAFFDQFANTPHLECGVHLRKKA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgcattttgaagaaaagattgctttaaataaagcattgttttcttctttatataatgaa
gaaattcagtgttttaaatcacctttaaaagcttatagaactagggcagaattttctata
tatcatcatgaaaatggggaaatttcttatgcaatgtttgaaaataagaaaaaaaatcct
attgaaaaatttgatatagcagatgaaaaaattcaaaaacatatgcctattttgttaaat
aatctaagcgaaaatttaaaacataagctttttggagtagagtttttagctacaaaatta
gatttaagtataactttacttttccataaaaatatagagttaattgcacaagatttacaa
gaattagcagaaaaattaaatctcaaactcatagcaagaagcaggggtaaaaaacttgta
tttaatggggagaatttaagacaagctttaaaaatcaatacaaatgaatttttatatgag
tttaataatgattgttttatccagcctaatacttttatcaatgaaaagatgattgaatgg
gttatatcttgtattggaagtgattttaaacaagatttattagagctttattgtggctat
ggaaattttaccatagctttagcaagaaattttaacaaagttttagcaactgaaatttct
aaaaaaaatatagaatttgctttaaaaaattgtgttttgaattctattgaaaatatagct
tttacaaggctttctagtgaagagttaagccaagctttgaaaaaagaaagagaatttaac
cgcttaaaaggtatagatttagatagctttaaaatatctcatgtcctagttgatcctcca
agagcagggcttgatctaagtgtgatcgagcttattaaaaattatgaaaatatcatttat
atttcatgcaatcctatcactttaaaagaaaatcttgaaatcttatgtcaaagtcatgaa
attttaaatttggccttttttgatcaatttgccaatactcctcatcttgaatgtggggtg
catttaagaaaaaaagcttag

DBGET integrated database retrieval system