KEGG   Clostridium bornimense: CM240_0523
Entry
CM240_0523        CDS       T03165                                 
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
clt  Clostridium bornimense
Pathway
clt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CM240_0523 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clt03400]
    CM240_0523 (uvrA)
DNA repair and recombination proteins [BR:clt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CM240_0523 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CM240_0523 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N RsgA_GTPase AAA_29 AAA_16 AAA_21 nSTAND1 nSTAND3 AAA_22 APS_kinase ATPase NMDAR2_C DnaJ_CXXCXGXG NACHT cobW Viral_helicase1 NfeD Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: CDM67688
UniProt: W6RTR8
Position
rep1:568209..571031
AA seq 940 aa
MKDRIVIKGAKVHNLKNVSLEIPRDKLVVFTGLSGSGKSSLAFDTLYAEGQRRYVESLSS
YARQFLGQMDKPDVEYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARIGVPH
CPKCGKEISQQTVDMMVDKVMSLPERTKIQVLAPLIRGRKGEHVKVLENIKKNGFVRARI
DGEVYDLEDEEIKLEKTKKHSIEAVVDRLVVKEGIEGRLAESIETSLKMGDGLVIIDIIG
EEEVLFSEKFACPECNISIEEIAPRLFSFNSPFGKCETCDGLGTLMEIDEDLVLPDKEKS
ILQGAIAPWGEGRLKEDSWNFAILKSLCEKYKFSLDTAINELPREVIEVLLYGTKGERIV
VNYRKDGREVKYNYIFEGIINELRRRYMETGSDFIKEEIENYMSDNACPKCKGARLKPEA
LSVKVDGKNINELCSLSIKEELEFINSLHLSEKNKIISDQIVKEISARLKFLIDVGLEYL
SLSREARTLSGGESQRIRLATQIGSALVGVLYILDEPSIGLHQRDNDKLIATMKNLRDIG
NTLVVVEHDEDTIREADYIVDIGPKAGEHGGEIIVAGDLETVKNCKKSITGQYLTGEKKI
EVPKERRKGNGNFIEVKNAKENNLKNISIKIPLGVFTAVTGVSGSGKSTLVNEILYKGIH
KKLTRAKENPGKHKEILGIENIDKIINIDQSPIGRTPRSNPATYTGVFDYIRELYAQTTE
AKMKGYKPGRFSFNVKGGRCEACRGDGIIKIEMQFLSDVYVPCEVCKGKRYNRETLEVKY
KGKNIDEVLNMTVEEGVEFFENIPRIKNKLQTLLDVGLGYVRLGQPSTQLSGGEAQRVKL
AYELSRRATGRTLYILDEPTTGLHTDDVKRLIEILQRLVDGGNSVVVIEHNLDVIKSVDY
IIDLGPEGGDKGGEILCKGTPEEIAKVKNSYTGQYLKKML
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgaaagataggatagttataaaaggcgcgaaggtacacaacttaaaaaatgtatcttta
gagatacctagagataaattagttgtgtttacaggcttgtctggatcaggaaagtcatcc
cttgcttttgatacattatatgctgaaggtcaacgaagatatgtagaatcattatcctct
tatgcacgtcaatttttagggcaaatggataaaccagatgtagaatatattgagggtttg
tcaccggctatatctatagatcaaaaaacaacatcaagaaatccacgatctacagtaggt
actgttacagagatctatgattatttgagattgttatatgctagaataggggttcctcat
tgtcctaaatgtggtaaggaaataagtcaacaaacagtggatatgatggtggataaagtt
atgtcattgccagaaagaacaaaaatacaggtgttggcgccacttattagaggaagaaaa
ggtgaacatgtcaaggtattagaaaacataaagaaaaatggttttgtaagggctagaatt
gatggtgaggtatatgaccttgaagatgaagagataaagttagaaaagactaaaaagcat
agtatagaagcagtagtagatagattagtagtaaaggagggaatagaaggtaggttagct
gaatctatagaaacatctctgaaaatgggtgacggattagttataatagatattatagga
gaagaagaagtattattctcagaaaaattcgcttgtcctgaatgtaacataagtattgaa
gaaatagcaccaagattattttcttttaactctccttttggaaaatgtgaaacttgtgat
ggacttggtactcttatggaaatagatgaagatttagttttaccagataaagaaaaatct
attcttcaaggagctatagcgccttggggtgaaggaagattaaaagaggattcttggaat
tttgctattcttaagtctttgtgtgagaagtataagttttcattagatactgcaataaat
gaattacctagagaagtaatagaagtattattatatggtactaaaggtgagagaatagta
gtaaattatagaaaagatggaagagaagttaaatataattatatctttgaagggattata
aatgaactaagacgaagatatatggaaacaggatcagattttataaaagaagaaatagaa
aattatatgagtgacaatgcatgtccgaaatgtaaaggtgcaagattaaaacctgaagca
ttaagtgtgaaggttgatggaaaaaacataaatgagttatgttcattatctataaaagag
gaattagaatttataaattcattacacttatcagagaaaaataaaataataagtgatcaa
atagttaaagagatttctgctaggttaaagtttttgatagatgtaggacttgagtatctt
tcattaagtagagaagcaagaactttatcaggtggggaatctcaaagaatacgtcttgca
acacaaattggatctgcattagtaggagttttatacatattagatgaacctagtattgga
ttacatcaaagagataatgataaattaattgctacaatgaaaaatcttagagacatagga
aatacattggtagtagtagagcatgatgaagatactataagggaagcagattatatagta
gatataggaccaaaagcaggagaacatggtggtgaaattatagtagccggagatttagaa
acagttaaaaactgcaagaagtctataacaggtcaatatttaacaggagaaaaaaagata
gaagtaccgaaggaaagaagaaaaggaaatggtaactttattgaagtaaagaatgccaaa
gagaataatttaaagaatattagcataaagattccattgggagtatttactgctgttact
ggggtatcaggttcaggaaaatcaacattggtaaatgagattttatataagggtatacat
aaaaaacttactagggcgaaagaaaacccaggaaagcataaagaaattttaggtattgaa
aatatagataaaataataaatattgatcaaagccctatcggtcgtacaccaagatcaaat
cctgctacttatactggtgtatttgattatataagagaactttatgcacaaactacagaa
gcgaagatgaagggatataaaccaggaagattttcatttaatgttaaaggtggaagatgt
gaagcttgtcgtggagatggaataataaaaattgagatgcaattcttatcagatgtatat
gttccatgtgaagtgtgtaaaggaaaaagatataatagagaaactttagaagtaaaatat
aaggggaaaaatattgatgaagtattaaatatgacagtagaagaaggggtagagttcttt
gaaaatatacctagaataaaaaataagttacaaacattattagatgttggtctaggatat
gttagattaggtcaaccatcaactcaactttctggtggtgaagctcaaagggttaagtta
gcttatgagttatctagacgtgcaacaggaagaacattatatattctagatgagccaact
actggacttcatactgatgatgtaaagagacttattgaaattcttcaacgtctagtagat
ggcggtaatagtgttgttgtaattgaacataatctagatgttataaagtcagtagattat
ataattgacctaggaccagaaggcggagataagggtggagaaatattatgcaaaggaact
ccagaggagatagctaaggtgaaaaattcctatacaggacaatacctaaaaaagatgtta
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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