KEGG   Clostridium bornimense: CM240_2129
Entry
CM240_2129        CDS       T03165                                 
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
clt  Clostridium bornimense
Pathway
clt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:clt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CM240_2129 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clt03400]
    CM240_2129 (ung)
Enzymes [BR:clt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CM240_2129 (ung)
DNA repair and recombination proteins [BR:clt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CM240_2129 (ung)
 Prokaryotic type
     CM240_2129 (ung)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: CDM69286
UniProt: W6RX88
Position
rep1:complement(2352736..2353410)
AA seq 224 aa
MVEFNNKWDDILSGEFSKDYYINLRKFLIDEYKNKKIYPSMYDIFNALKLTSYEDVKIVI
LGQDPYHGENQAHGLAFSVNKGIKIPPSLLNMYKELQNDLGCFIPNNGYLVPWAEQGVLL
LNTVLTVREGEPNSHKNKGWEIFTDKVISKLNEREDPIIFILWGNNAKEKLKLITNKSHF
ILTAPHPSPLSASRGFFGCKHFSKANDILKSLHKKEIDWQINNI
NT seq 675 nt   +upstreamnt  +downstreamnt
atggttgaatttaataataaatgggatgatatattatcaggggaattttctaaggattat
tatataaatcttagaaaatttcttattgatgaatataaaaataaaaagatatatcctagt
atgtatgatatatttaatgctttaaaattaacatcatatgaagatgttaaaatagttata
ttaggtcaagatccttatcatggagagaatcaagctcatggcttagctttttctgtaaat
aaaggaattaagattccaccatctttattaaatatgtataaggaattgcaaaatgattta
ggatgtttcatccctaataatggatatctagtaccttgggcagaacaaggagttttgctt
ttaaatacagtattaacagttagagaaggggaaccaaattctcataaaaacaaaggttgg
gagatatttactgataaagttatctcaaaattaaacgaaagagaagatcctataatattt
atattatggggaaataatgctaaagaaaaactaaaacttataacaaataagagccatttt
attttaacagcaccacatcctagtccgttatcagcttcaagaggattttttggatgtaaa
catttttcaaaagcaaatgatattttaaaatcactacataaaaaagaaatagactggcaa
ataaataatatataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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