KEGG   Clavispora lusitaniae ATCC 42720: CLUG_01975
Entry
CLUG_01975        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
clu  Clavispora lusitaniae ATCC 42720
Brite
KEGG Orthology (KO) [BR:clu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clu03016]
    CLUG_01975
Enzymes [BR:clu01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     CLUG_01975
Transfer RNA biogenesis [BR:clu03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    CLUG_01975
SSDB
Motif
Pfam: tRNA_int_endo DUF6594
Other DBs
NCBI-GeneID: 8499388
NCBI-ProteinID: XP_002618516
UniProt: C4Y193
AA seq 384 aa
MEKRKAKSLNAIYRNPLPIPLAQEKFGALPPLILHNPVSCVYFLYRLMRIYLSVSPAAEE
VPIAVEMALSGDEPVFYVNDAADMDRCWRQGFFGKGTLSRSEPLWKQRVSRRLNLAGRQD
EATMEEVTNVRREERKKYKELRSKFQKYETLSRQRELSPSEVEEWDNVRLQMSEAKETKS
VLADNLEEQRTTDWREEDLAIIDPTTMELRQQLEVLMLQKAEVFFLAFALDVVKVTHNHN
VLSLKQTFEACTGDNVVPQNKFILDYVVYHHFRSLGWCVRSGIKFGCDFLLYKRGPPFMH
AEYTVLVIPSDQESWKAWEDIMAVSRVVSGVKKILILVYVDVPATEVFDSVYRDMDRGKF
MELLSLYRVTEVVWRRWNPSRTRD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggaaaaacgcaaagccaaatctttgaacgccatataccgtaaccctctcccgataccg
cttgcgcaggaaaaattcggcgctttgccgccgcttattctccacaatccggtgtcatgt
gtatattttttgtaccgtttgatgcggatttatcttagcgtgagcccggcagcggaagaa
gtgcccatcgccgttgagatggcgctttcaggcgacgagcccgtgttctatgtaaatgac
gccgcagatatggacaggtgttggcgccagggcttttttgggaagggcactctttcaaga
tcagagcccttatggaaacagcgggtgctgcgtaggttaaacttggcgggccgccaggac
gaagccacaatggaggaagtgaccaacgtaagacgagaagaacggaaaaaatacaaagag
cttcggagcaagttccaaaagtacgagactttgctgcgtcagcgagagttgtcaccactg
gaggtagaggagtgggacaatgttcggcttcagatgctggaagcaaaggaaaccaagagc
gttttggctgacaatttagaagagcagagaaccaccgactggagagaagaagatttggcg
atcatagacccaacgactatggaactacgccagcagcttgaggtgttgatgcttcagaaa
gcagaagtctttttcctcgcttttgcccttgacgttgttaaggtgacacacaaccacaat
gtgctttctttgaaacaaacattcgaagcctgcactggtgacaacgtggtcccgcaaaac
aaattcatcttggactatgtggtgtaccaccactttcgaagcttaggatggtgtgttagg
agtggcatcaagtttggatgtgatttccttctctacaagcggggcccgccttttatgcat
gcagagtataccgtgttggtaattccatcagaccaagagagctggaaggcttgggaagac
ataatggccgtgagcagagtggtgagcggagtcaaaaaaatacttattttggtgtacgtc
gatgtgccagcgactgaggtgttcgattccgtttaccgggatatggaccggggaaagttc
atggagttactttctctctatcgtgtgactgaagttgtatggagacgctggaatcctagc
aggactagggactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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