KEGG   Clavispora lusitaniae ATCC 42720: CLUG_02405
Entry
CLUG_02405        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03420  Nucleotide excision repair
clu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CLUG_02405
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUG_02405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clu04121]
    CLUG_02405
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_02405
Ubiquitin system [BR:clu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CLUG_02405
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CLUG_02405
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 8497497
NCBI-ProteinID: XP_002616961
UniProt: C4Y433
AA seq 467 aa
MDTLLLERATGRISARACAATVTESLYGSLSPSTFRAHSAAVNSLALEKAEYRYLLSGSG
DSSLRLWDLSEDEIGPIRPPRAIATVSRRTAHRFGVSALRWWPEDTGMFISASFDHTVQA
WDTNRMAPAHVFEAGARVYAVDVCAARANRFSSQALVAVASDQPQVRLLDLRAGAAAHTL
QGHKGKTLAVTWHPQQPSILATGGFDGEVKVWDVRRAQSCLCRMDMARTNASRARTDISS
GGYSALPASSSESSDDESTINNASMYGSHSKHSPFRPRQTNVDRSEYSSSTRAHSGPVNG
LLWDEAGHMLYSAGNDDKIRVWDMEHSPPVNRLVNFGPLTRNKYLQTAPVALSARSEGET
QHLVFGADTGDVLVLRALDGKLMARLPGRVRTSAMVAGAPYSATYFGGTMSGDIVTWRGM
TRPPAIEGEYKDEEVDDVVPLDEIMCGSGEKEIAALYDDPYFRRESS
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggatactcttcttctcgaacgagccaccgggcgaatctcggcacgagcgtgtgcggca
acggtgacagagtcgctctatggctcactctcgcccagtacgtttcgcgcgcactctgcc
gcagtcaactcgcttgcactagaaaaagcagagtaccgttatctcctcagcgggagtggc
gactcgagtcttcggctctgggatttgagcgaagacgaaattggaccgatacgtccgccg
cgtgctattgcaactgtttctcggcgcacagcccaccgctttggtgtttctgcactacga
tggtggcccgaagatacaggtatgtttatttcggcctcctttgaccacacagtacaggcg
tgggacactaaccgcatggccccggcgcatgttttcgaggccggtgcgcgtgtgtatgct
gtggatgtctgtgcggcgcgcgccaatcgctttagctcgcaggctttggtggcagttgcc
agtgaccagccgcaggtgcgcctattagatctccgcgcgggcgcggcagcacatacgttg
caagggcataaaggtaaaacgttggctgtgacatggcatccgcaacaaccttctatttta
gcgacaggtggttttgatggagaggtgaaggtgtgggatgttcggcgcgcgcagagctgt
ctttgccgaatggatatggcgcgcactaatgcgtctcgcgctcggactgacatttcaagc
ggagggtattctgctctacctgcctcaagctcggaaagcagcgacgacgagagtacaatc
aataatgcatccatgtatgggtcgcatctgaaacactcaccatttcggccgcggcagaca
aacgtcgatcggctggaatatctgtccagcacgcgtgcgcatctgggaccagtcaatggg
cttctctgggatgaagcgggtcatatgctatattctgctggcaacgacgataaaattcgc
gtgtgggacatggaacactcaccgccagtgaaccgactagtcaactttgggccgctcacg
cgtaataagtatcttcaaactgcaccggtggcactcagcgcccgctcggaaggagaaact
caacatttggtgtttggtgcagatactggcgatgtgcttgtacttcgcgcgctcgacggg
aagttgatggcgcgacttccagggcgagtgcgcactagtgctatggtcgcaggcgcgccg
tattcagctacatactttggtggaaccatgtcgggcgacatagtaacatggagaggaatg
acaaggccaccggcgatcgagggcgagtacaaggacgaggaagttgatgatgtagtgccg
ttggatgaaatcatgtgtggctctggggaaaaggaaatcgctgcgctttacgacgatccc
tattttaggcgtgaatcttcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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