KEGG   Clavispora lusitaniae ATCC 42720: CLUG_02606
Entry
CLUG_02606        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03020  RNA polymerase
clu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLUG_02606
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUG_02606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clu03021]
    CLUG_02606
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_02606
Transcription machinery [BR:clu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CLUG_02606
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CLUG_02606
SSDB
Motif
Pfam: RNA_pol_Rpb4 GCV_T NPA
Other DBs
NCBI-GeneID: 8497452
NCBI-ProteinID: XP_002617162
UniProt: C4Y4N4
AA seq 191 aa
MNVSTSALGVRRRKPKSQNIDEEENASVLKLGPEFQLTQITNSGDSEQLIALNLSEARLL
IRAALKERKSKAENKKFEDNDDEENEREDEIANIELAGPNSNEIVHKTLNYLSMFSRFKN
SSSTETVEKLLNDFSSQASEPLHPFEIAQLGNLECEDAEEAKSLIPSLAHKVSDVQLKTL
LTELRKYQTLS
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaatgtcagcacgagtgcattaggtgtcagaagaaggaagcctaagagtcaaaatatc
gacgaggaggaaaatgccagtgttttgaagctagggccagagtttcaacttacgcaaatc
acaaactccggagacagtgaacagctcattgcattgaatttgtccgaagctcgacttttg
atcagggctgcgcttaaggagcggaagagcaaggctgaaaacaagaaattcgaggacaac
gatgatgaagaaaatgaaagagaagatgaaatagctaatatcgagcttgcgggacccaac
tcgaatgaaattgtgcacaaaaccttgaactacttatccatgttcagccggttcaagaat
tcatcctctacagaaactgttgagaagctcttgaacgatttcagtagccaagcttctgaa
ccattgcaccctttcgaaatagcccaattaggaaacttggaatgtgaagacgcagaagaa
gcgaaatcattaattcctagtctagcacacaaagtttctgatgtacagttgaaaactttg
ttgactgaattgagaaagtatcaaacattgtcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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