KEGG   Columba livia (rock pigeon): 102087903
Entry
102087903         CDS       T02912                                 
Symbol
CX3CL1
Name
(RefSeq) fractalkine
  KO
K05508  C-X3-C motif chemokine 1
Organism
clv  Columba livia (rock pigeon)
Pathway
clv04060  Cytokine-cytokine receptor interaction
clv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:clv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102087903 (CX3CL1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102087903 (CX3CL1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:clv04052]
    102087903 (CX3CL1)
Cytokines and neuropeptides [BR:clv04052]
 Cytokines
  Chemokines
   102087903 (CX3CL1)
SSDB
Motif
Pfam: IL8 CXCL16
Other DBs
NCBI-GeneID: 102087903
NCBI-ProteinID: XP_005512728
UniProt: A0A2I0LPP2
Position
Unknown
AA seq 579 aa
MPVSHVLAHSPHCVCATQGNLEERMVIYSLLGLTGFFFSSHHLISRKKNLLELVVPDLQG
CTLHCLGAVTHVYGLGLLVSSSVCPHPHHNLICSPRPRLNATSESSCQAHGEQRKVSECP
GGVLYQVLFVLWVLCLVTLAGGQPKAPLKCSIECSHFTSPIAAKRIRSYRRTEPRCSKQA
IIFTTLKSMEICADPEAEWVKKIVEKLDQKKAAASPLPRDATPAAAPEGPGVFQKHVGLT
VTAPSQTTAPTSFFQGTSTTVLERIHVPAARTEASSKSPPAMQETTQLPAGLSPVIWEGA
ARSEVTPEANRDSLKSPAPSTTFAAGMVFSQTTPCPTALVHGFDKAVGSTEEPVGHTANA
MADVRDSTSPTANSDPIAITEGPEHPVLSPNETLDPKSARANTSHTVSNSFSPDLHSILD
SREIATVPATPVPPATTSVSSLNPTSATGEGPSVRINKVSSSSADAFGTRIVDYLSSIGK
QGPSDMLVFTSQTFSGQARTQMTTERPSSLPLPRFLSGSQMHFVIPVSLVGGLMACSVAA
VWLYLKFGIKREETSREMIQGLLYQKAAHQNNLFPMEVI
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgccggtctcccacgtcctggctcacagccctcactgtgtgtgtgctactcaggggaac
ctggaggaacgtatggtcatatacagcctcctaggtctcactggcttctttttctccagt
caccacctgatttccaggaagaaaaacctactagagctggttgtccctgacttgcagggt
tgcacactccattgcttaggtgctgtgactcatgtttatggactgggattgctggtgtcc
tcctctgtctgccctcatccacatcacaatttaatctgcagtcccagacccaggctgaat
gccacctctgaatccagctgccaagctcatggggagcaaaggaaggtctcagagtgtcct
ggaggagtcctctaccaggtcctctttgtgctgtgggtcttgtgcctggtgaccctggct
ggagggcaacccaaagcacctctgaagtgctcaatagagtgcagccatttcacatctccg
atagcagcgaagcggataaggagctaccgcaggaccgagccccgctgcagcaaacaagcc
atcatatttactactttgaagtccatggagatttgtgcagatccagaggcagaatgggtg
aagaagatagtagagaaactggaccagaaaaaggctgcagcctccccacttccccgggat
gccaccccagcagcggcaccagaagggcctggtgtgttccagaaacacgttggtcttaca
gtaacagctccatcacaaaccactgctccaactagtttcttccaagggaccagcacaaca
gttttggagagaatacatgttcctgctgccaggacagaggcgtccagcaaatccccgcca
gccatgcaggaaaccacccagctccctgcaggattgtcccctgtgatctgggaaggtgct
gcccgctctgaagtcactccagaagcaaacagagattccttaaaatctcctgcaccgtca
acaacttttgcagcaggcatggttttcagccagaccaccccatgtcccacggcccttgtg
catggctttgacaaggctgtgggatctacagaagaacctgtaggacacactgcaaatgct
atggctgatgttcgagattcgacctctcctactgcaaattcagaccccatagctattact
gaaggaccagaacatcctgtactttctccaaatgaaaccctggaccctaaaagtgcaaga
gccaacacatcacatactgtgtctaacagttttagtccagatctccactccatcctagac
agcagggagattgccacagtcccagccacaccagttccgccagcgactacttcagtttct
agtctaaaccccacatctgccacaggcgaaggtccttctgtccgtatcaacaaggtttcc
agttcctctgcagatgcttttggtactagaatagttgattatttatcatctataggaaag
caaggtccttcagatatgttagtttttactagccaaacattctcaggccaagccagaaca
cagatgactacagaaagaccaagcagtctgcctcttcctcgcttcttgtcaggatctcaa
atgcattttgtcatcccagtttctctggtaggtggtctgatggcttgcagtgtcgctgct
gtatggctgtatctaaaatttggaatcaaaagagaagaaacgtcaagggaaatgatacag
ggcttgctctaccagaaggcagcacatcaaaacaatctctttccaatggaagtaatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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