KEGG   Columba livia (rock pigeon): 102089100
Entry
102089100         CDS       T02912                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridine-metabolizing bifunctional protein C1861.05-like
  KO
K16330  pseudouridylate synthase / pseudouridine kinase [EC:4.2.1.70 2.7.1.83]
Organism
clv  Columba livia (rock pigeon)
Pathway
clv00240  Pyrimidine metabolism
clv01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:clv00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    102089100
Enzymes [BR:clv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.83  pseudouridine kinase
     102089100
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.70  pseudouridylate synthase
     102089100
SSDB
Motif
Pfam: Indigoidine_A PfkB
Other DBs
NCBI-GeneID: 102089100
NCBI-ProteinID: XP_005500320
Position
Unknown
AA seq 691 aa
MIRKITYSLGRHVYAVVCGTTQVRRFLHGAYFKIQPSVQEALMEGRAVVALESTIITHGM
AYPQNLSMAREVEEIVTANGAVPATVGILRGRIHVGLTDEELEFLASSKNVVKVSRRDLP
FILSQGLSGGTTVSGTMIAAHKAGIPVFVTGGIGGVHRGGENTLDVSADLTELGRTPVAV
VSAGVKSILDIGRTLEYLETQGVCVAAFGESKEFPAFFSRQSGFQAPYHVRNEEEAAELI
ASAQGLGLSNGVLIAVPCPQERAASGQVIEEATQQALSEARSKGITGKELTPFMLQKINE
LTDGKSLDSNLALIQNNARVGSCIAVALSRLQKARRKGNLPRCGNTITPQPVVIGGINVD
FIAKALNPVILGGGQTNAGRVRRTFGGVGRNLADCLSRLGLTPLFLSXFSESLLNYCHHM
DISTILQLEGKSTATYCAVVTSAGELSVGLGDMDIHQQITEQYVSQFKENLCQAPLVCID
GNVPLSTIQYVCQLAREHQLAVCYEPTDENKASKPFLSDSWKALTYISPNLQELRAINRT
LGNPLPAELPSRLEDVLQTAMALARPLLAHLHCVVVTLGAHGVLLCGKSLGGSISLCPGA
HEKTAAASLCATHYPAIHISREEIVNVSGAGDSLMVLAQHDTDTCVRMGLLAASLSLRSY
EPISPNISTSSVNQEQVKSRSWPEVQVWKMD
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgattaggaagataacgtatagcctgggaagacatgtgtacgctgtggtatgtgggacc
acccaggtgagaagatttctgcatggtgcttatttcaagattcaaccttctgtacaggag
gccctgatggaggggagagcagttgtagccttggaaagcaccatcattacacatggcatg
gcctaccctcagaatctgagcatggccagagaggtggaagaaattgtaacagcaaatgga
gcagtgccagccactgtaggtattttaaggggtcgaatccacgtgggactcacagacgag
gaacttgagttcttggcaagcagtaaaaatgttgttaaagtatctcggagggatcttcct
ttcatcctcagccagggcttgtctggcggcactactgtgtctggaaccatgattgctgca
cacaaagcaggaatcccagtatttgtgacgggtggcataggaggcgtccatcggggagga
gagaacactctggatgtgagtgccgatttgacagagctgggacgaactccggttgctgtt
gtatctgcgggagtcaagtctatccttgatattggcaggacactggaatatctggaaacc
cagggagtctgcgtggctgcctttggagagtcaaaggagttcccagccttcttctcacgc
cagagtggcttccaggcaccgtatcacgtccggaacgaagaggaggcagctgaactcatt
gccagcgctcaggggctaggcctgagcaatggggtgctgatagcggtgccctgtccccaa
gagcgagctgcctcgggccaggtcattgaagaggccacccagcaagctctcagcgaagcc
aggtccaaaggcatcaccggcaaagaactgaccccttttatgttacagaagatcaatgaa
ttaaccgatgggaaatcgctggactccaaccttgctctgatccagaacaatgccagagtg
ggcagctgcattgcagtggccctgagcagactacagaaagccagaaggaaggggaacctg
cctcggtgtgggaacacaatcacacctcagccagtggtgattggaggtatcaacgttgac
tttatagccaaggcgctgaaccctgtcatcctgggtggtgggcagacaaatgctggaaga
gtgagacgaacctttggcggcgttggaagaaacttggcagactgcttaagtcgtcttggg
ctgacaccgctctttttatctnntttttcagagtctctcctgaactactgtcaccacatg
gacatcagcaccatcctgcagctggagggtaagagcacagccacgtactgtgctgtggtc
accagtgctggggagctcagcgtcggcttgggagatatggacatccaccagcagataaca
gagcaatacgtgtcccagttcaaggagaacctgtgccaggcccctctagtttgcattgat
ggaaatgtgcctctttccactattcagtatgtctgccaactagctagggagcatcagctg
gcagtgtgctatgagccaacagatgagaacaaggcctctaagccattcctctcagacagc
tggaaagcactcacatacatttcccccaacctgcaagaactaagagcaataaatcggacc
ctcgggaaccctctgccagcagagctgccatccaggttggaggatgttctccagactgca
atggccctggctcgccctttgctggcccacttgcactgtgtggtggtgaccctcggtgct
cacggtgtcctcctgtgtggaaagagcctgggagggagcatctcgctttgtccaggagct
cacgagaagactgctgccgccagcctctgtgccacccactaccccgccatccacatcagc
agggaggagatagtcaatgtctcaggagccggtgacagcttaatggtgcttgctcaacat
gacacagatacctgtgtccggatgggtctgcttgctgcaagcttgtctctccgttcctat
gagcccatttccccaaacatcagcacctccagtgtcaaccaggaacaagtcaagagcagg
agctggccagaggtgcaggtatggaagatggactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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