KEGG   Columba livia (rock pigeon): 102090837
Entry
102090837         CDS       T02912                                 
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102090837 (HSPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clv03019]
    102090837 (HSPD1)
   03110 Chaperones and folding catalysts [BR:clv03110]
    102090837 (HSPD1)
   03029 Mitochondrial biogenesis [BR:clv03029]
    102090837 (HSPD1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clv04147]
    102090837 (HSPD1)
Enzymes [BR:clv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     102090837 (HSPD1)
Messenger RNA biogenesis [BR:clv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     102090837 (HSPD1)
Chaperones and folding catalysts [BR:clv03110]
 Heat shock proteins
  HSP60 / Chaperonin
   102090837 (HSPD1)
Mitochondrial biogenesis [BR:clv03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    102090837 (HSPD1)
Exosome [BR:clv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102090837 (HSPD1)
  Exosomal proteins of other body fluids (saliva and urine)
   102090837 (HSPD1)
  Exosomal proteins of breast cancer cells
   102090837 (HSPD1)
  Exosomal proteins of colorectal cancer cells
   102090837 (HSPD1)
  Exosomal proteins of bladder cancer cells
   102090837 (HSPD1)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 102090837
NCBI-ProteinID: XP_021145471
Position
Unknown
AA seq 525 aa
MLRLPAVLRQVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDTIIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGVVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALTPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPAEVGYDAMLGDFVNMVEKGIIDPTKVT
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgctccgtttgcccgcagtgctgcgccaggtccggccggtgtccagggcgctcgccccg
cacctcacgcgtgcctacgccaaagatgtgaagttcggagcagacgccagagctctcatg
ctgcaaggagtggatcttctggcagatgctgtagccgtcaccatggggccaaagggaaga
acagttattattgaacaaagctgggggagtcccaaagtgacaaaagatggggtgacagta
gcaaaggcaattgatttaaaggacaaatacaaaaatatcggcgccaagttagttcaagac
gttgccaacaacacaaatgaggaggcgggagatggtaccaccacggcgacggtgcttgca
cgggctattgccaaggaaggcttcgagaagatcagcaaaggagctaatccagttgaaatc
aggaggggagtgatgcttgcagttgatactatcatagctgaactgaagaagctgtcgaaa
cctgttacaactccagaagaaattgcacaggttgccacgatatcagcaaacggagatcaa
gaaattgggaatataatctcggatgcaatgaagaaagttgggcgaaagggtgtaatcact
gtgaaggatggaaaaactctaaatgatgaattggaaatcattgaggggatgaaatttgac
agaggctacatctctccatattttattaatacaaccaaagggcagaaatgtgaattccaa
gacgcttacgttttaatcagcgaaaagaaaatttctagtgtacagtccatagttccagct
cttgaaattgccaattctcaccgcaaacctttggtcatcattgctgaagatgttgatgga
gaagctctcagcactctagtcttgaacagactgaaggttggtcttcaggttgttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagcttaaggacatggccattgctact
ggtggtgttgtgtttggagaagagggtttgagcctgaatgtggaagatattcagcctcat
gacttcggcaaagttggagaggtcattgtgaccaaagacgacaccatgcttctgaagggg
aagggtgaaaaggctcagatcgagaaacgcattcaagaaatcattgagcagctcgaagtc
accacaagcgactatgaaaaagagaaactgaacgagcgattggccaagctctctgatgga
gtagcagtgctgaaggttggcggcacgagtgacgttgaagtgaacgagaagaaagaccga
gtgacggatgccctgaacgcgacccgcgctgctgtggaggagggcatcgtcccgggcggc
ggctgcgccttgcttcgctgcattccagcattagatgccttaactccggccaatgaagat
cagaaaattggcattgaaataataaagagaacactgaaaatcccagcaatgactattgcg
aagaatgcaggtgttgaaggatcattaatagttgaaaaaatcctgcagagtccagcagaa
gttggctacgatgcaatgcttggggactttgtaaatatggtagaaaaaggaatcattgac
cccacgaaggtaacctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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