KEGG   Columba livia (rock pigeon): 102094459
Entry
102094459         CDS       T02912                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ryanodine receptor 1-like
  KO
K04961  ryanodine receptor 1
Organism
clv  Columba livia (rock pigeon)
Pathway
clv04020  Calcium signaling pathway
clv04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:clv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    102094459
   04020 Calcium signaling pathway
    102094459
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clv01009]
    102094459
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clv04147]
    102094459
   04040 Ion channels [BR:clv04040]
    102094459
Protein phosphatases and associated proteins [BR:clv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102094459
Exosome [BR:clv04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102094459
Ion channels [BR:clv04040]
 Voltage-gated cation channels
  Ryanodine receptor
   102094459
SSDB
Motif
Pfam: RYDR_Jsol RyR SPRY RIH_assoc RR_TM4-6 EF-hand_7 YebO
Other DBs
NCBI-GeneID: 102094459
NCBI-ProteinID: XP_021139096
Position
Unknown
AA seq 2487 aa
DIKNKRNPRLVPYPYTHAYGDVPMSPVTLSPCPPPGPDIKNKRNPRLVPYHLLDERTKKT
NRDSLCQAVRTLLGYGFNIEPPDQESSSQSAPRGGVDRWRVFRAERGYAARAGKWYFEFE
AVTTGDMRVGWARPQLRPDVELGADDMAYVFNGHRAQRWHVGSEPFGRPWQAGASRSTGV
GCLIDLGECHMSFTLNGEMLISDAGSEVAFRDFDVGDGFVPVCSVGQEQEGRLNLGQDVG
TLRFFSICGLQEGFEPFAVNMKRPIALWFTKSLPQFETVPPDHPQLEVTRMDGTEDVVPD
ERDDPEVIMNTTTVRFSVRIFAGQEPSSVWVGWVTPDFHQHDPASFELSRVRTVTVTMGD
DRGNVHDSIKRSNCYMVWGGEFASTGQQARVSHSDLVXXXXXXXXXXXXXXXXXGKEINT
FFQVEPNTKLFPAVFALPTSQNVIQFELGKLKNIMPISAAMFSSERKNPEPQCPPRLAIQ
ALTPVTWSRMPNEFLAVETTRLGERQGWGVECTQPLVMMALHIPEENRCLDILELSERQD
LLRFQWHTLKLYCAVCALGNNRVAHALCSHVDQAQLLFAIESAELPGPLRAGYYDLLLAM
LLDAAQRARASMSAEFIIPMTDATKAITLFPGGGRAPGPPGVGPSACLRPQPHFAEPCFV
LAAGAGRAPLSPGIPLGMLGTRAIRMLAEAVAGGGPPAXXXXXXXXXXXXXXXXXXXXXX
LGDADVRRVLRMIEPRLFGDARREPPAQGEEEEEEEEEEARRKAIEAGEMEEEERERKEE
EEEEDGLEEGLLQMKLPESVKLEMCNLLQYFCERELQHRVEAIVAFSERHVERLQRDQRR
RYGQLMRAMTMSAAETARRTREFRSPPQEQVNMLLQYKGGADEEDCPVPEDIRDELLDFH
NDLLAHCGIELVTEEEEEEEEASLRQRLLGLEPPAPSSLQELISQTMVHWAQESFIQSPE
LVRAMFSLLHRQYDGLGELCRALPKAYSISARSVPDTQALLQCLGQIRSLLIVQMGPEEE
MLMIQSIGCVRPPPGPSGHPWLTPSPQQHPLVTPSPQRAPLAHPESPTAPPGQPESLMGT
TCRQQAPPGYPESLTGTTCRQQAPPGYPESPTGTMCPQRAPPGHPESLMGTTCPHPAPPG
HPESPTGTAWPHPAPPGHPESPTGTMCPQRPPPGYPESLMGTTCPQQAPLGYPESPTGTT
CPQRAPPGHPKSPVVTYLASCGLQSCPMLLAKGYPDIGWRGRALPRLPALRRLRQRFVPE
HKAPMVLFLDRVYGVESQEFLLRVLEVGFLPDMRAAASLDTATFSTTEMALALNRYLCQA
VLPLVTKCAPLFAGTEHRAIMVDSMLHTVYRLSRGRALTKAQRDVIEECLMALCRWGRLS
MLQHLLRRLVFDVPILNEFAKMPLKLLTNHYERCWKYYCLPSGWPHGDADKEIYRWPIKE
SLKAMLAWEWTVEKAREGEEDKAEKKKTRKISQSAQATYDPSHGYSPQPVDLSGVTLSRE
LQVGVPPCPHVPPCRHVPTPLIQNNWSFGETVDEEAKTHPMLRPYKTFSEKVPWGGSHPL
LVPYDTLTAKEKARDREKAQELLKFLQLQGYAVTRGLKDMELDTSSIEKRFAYGFLQQLL
KWMDISQEFIAHLGGAQGGPLAEGTLFCKLAALVRHRVSLFGTDAPAVVNCLHILARSLD
AKTVMKSGPEIVKAGLRSFFEGASEDIEKMVENLRLGKVTQSRTQVKGVAQNLSYTTVAL
LPVLTSLFQHLAQHRFGDDVILDDVQVSCYRILSSIYSLGTTRNPYVERQRPALGECLAR
LAAAFPVAFLEPQLNEFNPCSVYSTKSPRERAMFAQPIVSRARPELLRSHFIPTLEKLKK
RAGKVVAEEEQLRMEAKAEGEEAELLIRDEFAVLCRDLYALYPREEQNFVVQNEINNMSF
LTADSKSKMKDTDEEVREFLNNNLHLQGKCENSSSLRWQLALYRSMAGRAEDSDSPDKVV
RRVQEVSAVLYHLEQMENPYKSKKALGERGEMVSSTLKLGISILNGGNAEVQQKMLDYLK
EKREVGFFQSIQALMQTWEKVMSDDEFTQDLFRLLQLLYFQNYLRTQTGNTTTINIIICT
VDYLLRLQDVIDEQGKRNFSKAMAVAKQVFNSLTEYIQGPCTGNQQSLAHSRLWDAVVGF
LHVFAHMMKKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGHVVNGTIARQMVDMLVESS
SNVTMILKFFDMFLKLRDIVSSDAFRDYVSDPRGLISKKDFQKAMDSQKQFEPAEIQFLL
SCSEADENEMIDVEAFAGRFQEPARDIGFNVAXAEHVPHDQRLRTFLEQAESILEYFRPF
LGRIEIMGAARRIERLYFEISAANKAQWEMPQVKESKRQFIFDVVNEGGEAEKMELFVNF
CEDTIFEMQIAGPGGEPEKADTENGEKAGAEAAEGGSEHGPPPKRRKSVPRERKEPPAEG
AFEFWAELEVQRVKFLVRGGWGWGAPR
NT seq 7464 nt   +upstreamnt  +downstreamnt
gacatcaagaacaagcgcaacccccgcctggtcccatacccatatacccatgcctatggt
gacgtccccatgtccccggtgaccctgtccccgtgtcccccgcctggtcccgacatcaag
aacaagcgcaacccccgcctggtcccgtaccacctgctggacgagcgcaccaagaagacg
aaccgggacagcctgtgccaggcggtgcggaccctgctgggctacggcttcaacatcgag
ccccccgaccaggagagctcgtcgcagagcgccccccgcggcggggtggaccgctggcgg
gtgttccgggccgagcgcgggtacgcggcgcgtgccgggaagtggtacttcgagttcgag
gccgtgaccacgggggacatgcgcgtggggtgggcgcggccgcagctgcgccccgacgtg
gagctgggagctgacgacatggcctacgtgttcaacgggcaccgcgcgcagcgctggcac
gtgggcagcgagccgttcgggcggccgtggcaggcgggggcttcacgctcaacgggcgtg
ggctgcctcatcgacctgggcgagtgccacatgagcttcacgctcaacggggagatgctc
atcagcgacgcgggctccgaggtggccttccgggacttcgacgtgggcgacggcttcgtg
cccgtgtgcagcgtggggcaggagcaggaggggcggctgaacctgggccaggacgtgggc
acgctgcgcttcttcagcatctgcgggctgcaggagggcttcgagcccttcgccgtcaac
atgaagcgccccatcgccctctggttcaccaagagcctcccccagttcgagaccgtgccc
cccgaccacccccagctcgaggtgacgcgcatggatgggacggaggacgttgtccccgac
gagcgcgacgaccccgaggtcatcatgaacaccaccacggtacgcttctcggtgcggatc
ttcgcggggcaggagccctcgagcgtctgggtgggctgggtgacccccgacttccaccag
cacgacccggcctccttcgagctgtcccgcgtgcgcaccgtcaccgtcaccatgggcgac
gacaggggcaatgtccacgacagcatcaagcggagcaactgctacatggtgtgggggggc
gagtttgccagcacggggcagcaggcgcgcgtgagccacagcgacctggtcnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggcaaggagatcaacacc
ttcttccaggtggaacccaacaccaagctattcccggctgtcttcgccctccccaccagc
cagaacgtcatccagtttgagttgggcaagctcaagaacatcatgcccatctcagccgcc
atgttcagcagcgagcggaagaacccggagccgcagtgcccgccgcgcttggccatccag
gcgctgacgcccgtcacctggagccgcatgcccaacgagttcctggccgtggagaccacg
cggctgggcgagcgccagggctggggcgtcgagtgcacgcagcccctggtcatgatggcc
ctgcacatccccgaggagaacaggtgcctggacatcctggagctgtcggagcggcaggac
ctgctccgtttccagtggcacacgctcaagctgtactgcgccgtgtgcgcgctgggcaac
aaccgcgtggcgcacgcgctctgcagccacgtggaccaggcgcagctgctcttcgccatc
gagagcgccgagctgccggggccgctgcgggccggctactacgacctgctgctggccatg
ctcctggacgcggcgcagcgcgcccgcgcctccatgagcgctgagttcatcatccccatg
accgacgccaccaaggccatcacgctgttccccggtggtggccgcgcgccgggacccccc
ggcgtggggccgagcgcttgcttgagaccccagccccatttcgccgagccctgtttcgtc
ctggcggccggcgccgggcgggcgccgctcagccccggcatcccattggggatgctgggg
accagggccatcaggatgctggcggaggcggtggcgggggggggcccccccgcgcnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ctgggcgacgccgacgtgcggcgcgtcctgaggatgatcgagcccaggctgttcggggac
gcgcgcagggagcccccggcgcagggcgaggaggaggaggaggaggaggaggaggaggcc
cggaggaaggccatcgaggcgggggagatggaggaggaggagagggagaggaaggaggag
gaggaggaggaggacgggctggaggaggggctgctgcagatgaagctgcccgagtcggtc
aagctggagatgtgcaacctgctgcagtacttctgcgagcgggagctgcagcaccgcgtg
gaggccatcgtggccttctcggagcggcacgtggagcggctgcagcgcgaccagcggcgc
cgctacggccagctcatgcgcgccatgaccatgtcggccgccgagaccgcccggcgcacc
cgcgagttccgctcgcccccccaggagcaggtcaacatgctgctgcagtacaaggggggt
gcggacgaggaggactgtcccgtccccgaggacattcgtgacgagctgctcgacttccac
aacgacctgctggcccattgcggcatcgagctggtgaccgaggaggaggaggaggaggaa
gaggcgtcgctgcggcagcggctgctggggctggagccacctgcacccagctcgctgcag
gagctgatctcgcagaccatggtgcactgggcgcaggagtcgttcatccagagccccgag
ctggtgcgcgccatgttcagcctgttgcaccggcagtacgacgggctgggcgagctgtgc
cgcgcgctgcccaaggcctacagcatcagcgcccgctccgtgcccgacacgcaggcgctg
ctgcagtgcctgggccagatccgctcgctgctcatcgtgcagatgggccccgaggaggag
atgctcatgatccagagcatcgggtgcgtgcggcctccgcctggccccagtgggcacccc
tggctcaccccgagtccccaacagcaccccctggtcaccccgagtccccagcgggcaccc
ctggctcaccccgagtccccaacagcaccccctggtcaacccgagtccctaatgggcacc
acgtgtcgccagcaggcacccccgggttaccctgagtccctaacgggcaccacgtgtcgc
cagcaggcacccccgggttaccctgagtccccaacgggcaccatgtgtccccagcgggca
cccccgggtcaccccgagtccctaatgggcaccacgtgtccccatccagcacccccgggt
caccccgagtccccaacgggcaccgcatggccccatccagcacccccgggtcaccccgag
tccccaacgggcaccatgtgtccccagcggccacccccgggttaccccgagtccctaatg
ggcaccacatgtccccagcaggcacccctgggttaccctgagtccccaacgggcaccacg
tgtccccagcgagcacccccgggtcaccccaagtccccagtggtgacgtacctggcgagc
tgcgggctgcagagctgccccatgctgctggccaagggctaccccgacatcggctggcgg
gggcgagcgctacctcgacttcctgcgcttcgccgtcttcgtcaacgcttcgtccctgag
cacaaggcgcccatggtcctgttcctggaccgcgtgtacggggtggagagccaggagttc
ctgctgcgggtgctggaggtgggcttcctgcccgacatgcgggcggccgcctcgctggac
acggccacattcagcacaacggagatggcgctggcgctgaaccggtacctgtgccaggcg
gtgctgccgctggtcaccaagtgcgcaccgctgttcgccggcaccgagcaccgcgccatc
atggtggactccatgctgcacaccgtgtaccggctgtcccgcggccgcgcgctcaccaag
gcccagcgcgacgtcatcgaggagtgcctcatggccctgtgccggtggggacgtctgtcc
atgctgcagcacctcctgcgccgtctggtcttcgacgtccccatcctcaacgagttcgcc
aagatgcccctcaagctgctgaccaaccactacgagcggtgctggaagtactactgcctg
cccagcggctggccccatggggacgcggacaaggagatctaccggtggcccatcaaggag
tcgctgaaggccatgctggcctgggagtggacggtggagaaggcccgcgagggggaggag
gacaaagccgagaagaagaagaccaggaagatctcccagtctgcacaggccacctatgac
cccagccatggctacagcccccagcccgtggacctgtcgggggtgacgctgtcccgggag
ctgcaggtgggtgtccccccgtgtccccatgtccccccgtgtcggcacgttcccaccccc
ctaatccagaacaactggtcctttggggagacggtggatgaagaagccaagacccacccc
atgctgcgcccatacaagaccttctccgagaaggtgccgtgggggggctcgcaccccctg
ctggtcccgtacgacacgctgacggccaaggagaaggcgcgggaccgcgagaaggcgcag
gagctgctcaagttcctgcagctgcagggctacgccgtcacccgggggctgaaggacatg
gagctggacacgtcgtccatcgagaagcgtttcgcctacgggttcctgcagcagctgctc
aagtggatggacatctcgcaggagttcatcgcgcacctggggggggctcaggggggtccc
ctggctgaggggaccctgttctgcaaactggccgccctggtccggcaccgcgtctcgctc
ttcgggaccgacgcgccggccgtggtgaactgtctgcacatcctggcgcggtcactggat
gccaagacggtgatgaagtcgggccccgagatcgtgaaggccgggctgcgctcgttcttc
gagggcgcgtccgaggacattgagaagatggtggagaacctgcggctggggaaggtgacg
cagagccggacgcaggtcaagggggtggcgcagaacctcagctacaccacggtggcgctg
ctgcccgtgctcacctcgctgttccagcacctggcgcagcaccgcttcggcgacgacgtc
atcctggacgacgtgcaggtctcgtgctaccgcatcctcagcagcatctactcgctgggc
accacccgcaacccctacgtggagaggcagcgccccgccctgggggagtgcttggcccgt
ctcgccgccgccttcccggtcgcgttcctggagccgcagctgaacgaattcaacccctgc
tcggtctacagcaccaagagcccccgcgagcgcgccatgttcgcgcagcccatcgtgagc
cgcgcgcggccggagctgctgcgctcgcacttcatccccacgctggagaagctgaagaag
cgcgcggggaaggtggtggccgaggaggagcagctgcgcatggaggccaaggccgagggc
gaggaggccgagctgctcatccgcgacgagttcgccgtgctctgcagggacctctacgcg
ctctacccgcgcgaggagcagaacttcgtggtgcagaacgagatcaacaacatgtcgttc
ctgacggccgacagcaagagcaagatgaaggacacggacgaagaggtgcgggagttcctc
aacaacaacctgcacctgcagggcaagtgtgagaacagctcgtcgctgcgctggcagctg
gctctgtaccgctccatggccggcagggccgaggactcggacagccccgacaaggtcgtg
cgcagggtgcaggaggtgtcggccgtgctctatcacctcgagcagatggagaacccctac
aagtccaagaaggccctgggggagcggggggagatggtttcctccaccctcaagttgggc
atctccatcctcaacgggggcaacgccgaggtgcagcagaaaatgctggattacctgaag
gagaagcgggaggtcgggttcttccagagcatccaggcgctgatgcagacctgggagaag
gtgatgtcggacgacgagttcacgcaggatctgttccggctgctgcagctgctctatttc
cagaactacctgcgcacccagacggggaacacgacgaccatcaacatcatcatctgcacc
gtggactatctgctgcgcctgcaggacgtcatcgatgagcagggcaagcgcaacttctcc
aaggccatggccgtggccaagcaggtcttcaacagcctcaccgagtacatccagggtccc
tgcacggggaaccagcagagcctggcccacagtcgcctctgggacgccgtcgtcggcttc
ctccacgtcttcgcccatatgatgaagaagctggcccaggactccagccagatcgagctc
ctgaaggagctgctggacctgcagaaggacatggtggtgatgctgctgtccctgctggaa
ggccacgtggtgaacggcacgatcgcgcgccagatggtggacatgctggtggagtcctcc
agcaacgtcaccatgatcctcaagttcttcgacatgttcctgaagctgcgcgacatcgtg
tcgtcggacgcgttccgcgactacgtgtcggacccgcgggggctcatctccaagaaggac
ttccagaaggccatggacagccagaagcagttcgaacccgccgagatccagttcctgctc
tcctgctccgaggccgacgagaacgagatgatcgacgtggaggcgttcgccgggcgcttc
caggagccggcgcgcgacatcggcttcaacgtggccngtgcggagcacgtcccgcacgac
cagcggctccgcaccttcctggagcaggccgagagcatcctggagtacttccggcctttc
ttggggcgcatcgagatcatgggggcggcgcggcgcatcgagcgcctctacttcgagatc
agcgctgccaacaaggcgcagtgggagatgccacaggtcaaggagtccaagcgccagttc
atcttcgacgtggtgaacgagggcggcgaggccgagaagatggagctctttgtcaacttc
tgcgaggacaccatcttcgagatgcagatcgcggggccggggggggagcccgagaaagcc
gacacggagaacggggagaaggccggggcggaggcggccgagggggggtcggagcacggg
ccccccccgaagcgcaggaagtcggtgccgcgggagcgcaaggagccgccggcagagggg
gcgttcgagttctgggcagagctggaggtccagagggtcaagttcctggtacgggggggc
tgggggtggggggcaccccggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (118)   
   KEGG ORTHOLOGY (1)   
   RefGene (114)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (134)   

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