KEGG   Columba livia (rock pigeon): 102097870
Entry
102097870         CDS       T02912                                 
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
clv  Columba livia (rock pigeon)
Pathway
clv00260  Glycine, serine and threonine metabolism
clv00630  Glyoxylate and dicarboxylate metabolism
clv00670  One carbon pool by folate
clv01100  Metabolic pathways
clv01200  Carbon metabolism
clv01230  Biosynthesis of amino acids
clv01240  Biosynthesis of cofactors
Module
clv_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:clv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    102097870 (SHMT1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    102097870 (SHMT1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    102097870 (SHMT1)
Enzymes [BR:clv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     102097870 (SHMT1)
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 102097870
NCBI-ProteinID: XP_005504532
UniProt: A0A2I0LTH9
Position
Unknown
AA seq 552 aa
MLPEHFPRCRPTGDERDSDWSRSGGACLSDLCQGRGFPRGSGAGSGPRPGRAEPRSVLRG
DIGLSRRMENSMQSDGGLLSAELWASHNRVMLEPLESNDPEVHSIIKKEKQRQRLGLELI
ASENFASRAVLEALGSCMNNKYSEGYPGQRYYGGTEFIDELERLCQKRALQAYGLDPQKW
GVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMP
YKVNPKTGYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADANSAYLLADMAH
ISGLVAAGVVPSPFDHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESL
INQAVFPGLQGGPHNHAIAGIAVALRQAMTPEFKAYQQQVVANCKALSAALIELGYDIVT
GGSDNHMILLDLRSRGTDGGRAERVLEICSIACNKNTCPGDVSALRPSGLRFGTPALTSR
GFRQDDFRMVAQYIHRGIELTLRVQKDMSPKATLKEFKEKLEEEKYQRELKALKEEVEAF
AGTFPLPGLPVL
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgcttccggaacattttccgcgctgccgacccactggggacgaacgagactctgattgg
tcgaggagcggaggggcgtgtctgagcgatctatgccaggggcgcgggttcccgcgcggt
agcggagcgggatcgggaccgcgaccgggtcgagccgagccgcgctctgtgctgcgtggt
gacatcggactcagcaggaggatggaaaactcaatgcagagcgacgggggcctcctcagt
gcggagctctgggcctcccataacagggtgatgctagagccgctcgagagcaatgaccca
gaggtgcacagcatcatcaagaaggagaagcagcggcagaggctggggctggagttaatt
gcatcggagaactttgcgagccgagcagtcctggaggccctgggatcctgcatgaacaac
aaatactccgagggttacccaggacagaggtactacggtgggacagagttcatagacgaa
ctggaaaggctgtgccagaagcgagccctgcaggcatacgggctcgaccctcagaagtgg
ggtgtcaatgtccagccctactcagggtcaccggcaaactttgcggtgtacacagctctg
gtggagccccatggcaggatcatggggctggacctgcccgacggaggccacctcacccat
gggttcatgacagacaagaagaagatctctgccacctctgtcttcttcgagtccatgccc
tacaaggtcaaccccaagaccggttacattgactatgaccggctggaggagaacgctcgc
ctcttccaccccaagctgatcatagcaggtgtcagctgctactcgcgcaacctggactat
gcccgcatgcggaagatcgccgacgccaacagtgcctatctgctggctgacatggcccac
atcagtgggctggtggctgccggtgtcgtgccgtccccctttgaccactgcgatgttgtc
tccaccaccacccacaagaccttgcggggctgcagggccggcatgatcttctaccgcaaa
ggcacccgcagcgtggaccccaagacgggcaaggaaacactctacaacctggagagcctc
atcaaccaggcggttttccctgggctgcagggaggcccgcacaaccacgccatcgcaggg
atcgccgtggcgctgcgccaggccatgacgcccgagttcaaggcttaccagcagcaggtg
gtggccaactgcaaagcgctctcggccgcgctgattgagctgggctacgacatcgtcacg
gggggctctgacaaccacatgattctcctggacctgcgcagcagaggcacggatggtggc
cgggccgagcgggtgctggagatctgctccatcgcctgcaacaagaacacatgccctggt
gatgtcagtgccctgcgccccagcggcctgcggtttgggacaccagctctcacctcccgc
ggctttcggcaggacgatttccgcatggtggctcagtacatccacagagggatcgagctg
acactgcgcgtgcagaaggacatgagccccaaggccacgctgaaggaattcaaggagaaa
ctggaggaggagaaataccagagggagctgaaagcactgaaggaagaggtcgaagccttc
gcagggaccttcccgctcccagggctgcccgtgctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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