KEGG   Columba livia (rock pigeon): 102097954
Entry
102097954         CDS       T02912                                 
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
  KO
K10646  E3 ubiquitin-protein ligase TRAF7 [EC:2.3.2.27]
Organism
clv  Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:clv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clv04121]
    102097954 (TRAF7)
Enzymes [BR:clv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102097954 (TRAF7)
Ubiquitin system [BR:clv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    102097954 (TRAF7)
SSDB
Motif
Pfam: WD40 NBCH_WD40 WD40_like zf-RING_UBOX zf-C3HC4 zf-TRAF zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-C3HC4_3 Nup160 zf-RING_5 PKcGMP_CC DUF4164 DUF641 MIOS_WD40 DUF1664 Filament KxDL DUF16
Other DBs
NCBI-GeneID: 102097954
NCBI-ProteinID: XP_021152415
Position
Unknown
AA seq 670 aa
MSSNKNARYNRFSSGTTNITTSENTNGTRMETTFGPAYSAVTTITKPDGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPAAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagctcaaacaagaacgctcgctacaatcgtttctccagtggcacaacaaacatcact
acttccgaaaacactaacgggacaagaatggaaacaacttttgggccagcctactctgct
gtgacgaccatcacaaagcctgacgggaccaatacttttaaacagcatcgtcggaccccg
tcctcctccagcacactcacctactccccacgagatgaggacgatggcatgcctccaatc
agcaccccacgccgctctgactccgctatctccgtccgttcattacactccgagtccaac
atgtccttgcgctcaacattctcactccatgaggaagaggaggagccagaacccttggtt
tttgctgaacaaccatctgtgaagctgtgctgccaactgtgctgtagtgtgtttaaggat
ccagttatcacaacctgtgggcacacattttgtagaagatgtgccttaacatctgagaag
tgccccgtggacaacgccaaactgaccgtcgtggtgaacaacattgcggtggctgagcag
atcggggagctcttcatccactgcaagtacggctgccggcccgcagccagcagcaagcct
gctgcattcgaggtggatccccggggctgccccttcacgattaaactgagtgccaggaaa
gatcatgaaagcagctgtgattacaggccggttcgctgccccaataaccccagctgccca
cctctgctgaaaatgaacctggaggcacatctgaaagagtgcgagcacataaagtgtccc
cactccaaatacgggtgtacgttcataggaaatcaagacacttatgagacccacttggag
acgtgcaagttcgaggggctgaaggagttcctgcagcagacagatgatcgcttccatgag
atgcaggtggcgatggcccagaaggaccaggaaattgccttcctgcgctccatgctgggg
aagctctcagagaagatcgaccagctggagaagaacctggagcttaagtttgatgtgctg
gacgagaaccagagcaagctgagcgaggacctgatggagttccgcagggacgcgtccatg
ctgaatgatgaactctcccacattaatgctcgactcaacatgggcatcctgggatcctac
gatcctcagcagatcttcaagtgcaaggggacctttgtgggacaccagggccctgtctgg
tgtttgtgtgtttactccataggagacttgctcttcagtggctcttcagacaaaaccatt
aaggtgtgggatacctgtaccacatacaagtgccaaaagaccttggagggtcacgatgga
attgtactggctctctgtatccaggggaacaagctgtacagcggctctgctgactgcacc
atcattgtctgggatatccaaaacctgcagaaagtgaacacgatccgagcacacgacaat
cctgtttgcactttggtctcctcgcataacatgctgttcagcggctctctcaaagccatc
aaggtctgggatattgtaggtaccgaactcaagctgaagaaggagctgacaggtctaaat
cactgggtgcgagcgctggtggcttctcaaaactatctctacagcggatcttaccagacg
atcaagatctgggacatccgcaacttggagtgtgtccacgtgctgcagacatcgggaggc
agtgtctactccatcgctgtgacaaaccaccacatcgtgtgtggcacctacgagaacctc
atccatgtctgggacatagagacaaaggagcaggtccgcacactgaccgggcacgtgggt
acagtctatgccctcgctgtcatctccacgccggatcaaaccaaagtcttcagcgcatcg
tacgaccggtctctcagggtgtggagtatggacaacatgatctgtacccagacgctgctg
cgacaccagggcagcgtcaccgccctcgccgtctccaggggacgcctcttctctggtgct
gtggacagcactgtaaaggtctggacttgctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (57)   

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