KEGG   Cobetia marina: BFX80_00205
Entry
BFX80_00205       CDS       T04789                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
cmai  Cobetia marina
Pathway
cmai03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cmai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BFX80_00205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmai03021]
    BFX80_00205
   03400 DNA repair and recombination proteins [BR:cmai03400]
    BFX80_00205
Enzymes [BR:cmai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BFX80_00205
Transcription machinery [BR:cmai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BFX80_00205
DNA repair and recombination proteins [BR:cmai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BFX80_00205
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AOM00028
Position
complement(46876..47127)
AA seq 83 aa
MARVTVEDCLENVDNRFQLVMISTRRARQLSRGSRNAQLPWENDKPTVLALREVAAGLVN
RDILNEPVEAPIQRKPVLPQIED
NT seq 252 nt   +upstreamnt  +downstreamnt
atggcccgcgtaaccgtagaagattgcctcgagaacgtcgacaaccgcttccagctggtg
atgatctccactcgtcgtgcccgtcagctgtcacgtggcagccgcaacgcccaactgccg
tgggaaaacgacaagccgaccgtgctggccctgcgcgaagtggcggcgggtctggtcaac
cgcgacatcctgaatgagccggtcgaagctccaatccagcgcaagccggtgctgccgcag
atcgaggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system