KEGG   Cobetia marina: BFX80_00280
Entry
BFX80_00280       CDS       T04789                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
cmai  Cobetia marina
Brite
KEGG Orthology (KO) [BR:cmai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmai03400]
    BFX80_00280
Enzymes [BR:cmai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BFX80_00280
DNA repair and recombination proteins [BR:cmai03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BFX80_00280
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 DEAD
Other DBs
NCBI-ProteinID: AOM00042
Position
61062..63143
AA seq 693 aa
MTEIRDRLAKLNPRQQEAVRAIDGPCLVLAGAGSGKTSVITTKIAYLVQECGMKARNIAA
VTFTNKAAREMKERVGKMLKGREGHGLIVSTFHTLGLTIIRGELKTLGYKPGFSLFDTDD
AKVLIKELMHKEADTDAEQINAVQSQISTWKNDLILPGAALSHAEDEDAQYAAVIYEAYN
RHLKAYNAVDFDDLILLPVVLFRDHPEVLARWQRRIHYMLVDEYQDTNISQYLLVKMLMQ
ERQTFTVVGDDDQSIYAWRGARPENLVTLGEDFPRLNLIKLEQNYRSTGIILRAANTLIA
NNPHVYDKTLWSQMGDGDPIRIIMNRNEEAEAERVAGEILTRRIKEGAEWRDFAVLYRGN
FQARLLELKLQHYQIPYKLSGGTSFFGRNEIKDAMAYLRLLINPADDNAFLRIVNVPRRE
VGPGTLEKLANYATGRGVSLYAACSEMGLREQLSERALDRLGRFTHTLDRVRREMDAGQS
ISAIRELFHEVDYEGWLYQNASAPKIAERRMANVWILIDQLEKSISGNPQDQVEELEGSE
AMVGDTETGDVAAAISRLVLRDILEQQAEEDDSDRVQLLTLHASKGLEFPHVYVMGLEED
LLPHRNSIEMETVEEERRLAYVGITRARRTLVLTLARQRKTYGEMMDCVPSRFLDELPPE
DLEWEGRADKPQDQEKKVARGRDAIAGLRSLLG
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgaccgagatccgtgatcgcctcgccaagctcaatccccgccagcaggaagccgtgcgc
gccatcgatggcccctgtctggtactggcaggggccggttccggcaagaccagcgtgatc
acgaccaagatcgcctatctggtgcaggaatgcggcatgaaggcacgcaacatcgccgcc
gtgaccttcaccaacaaggcggcgcgcgagatgaaggagcgagtcggcaagatgctcaag
ggccgcgagggccacgggctgatcgtctcaaccttccacaccctcggcctgaccatcatc
cgcggcgagctgaagacactgggctacaagccgggcttctcgctgttcgacaccgatgac
gccaaggtgttgatcaaggaactgatgcacaaggaagccgacaccgacgccgagcagatc
aatgcggtgcagagccagatttccacctggaagaatgacctcatcctgcccggggcggcg
ctgtcgcatgccgaggatgaagatgcccagtacgccgcggtgatctacgaggcctacaac
cggcatctcaaggcctacaacgcggtggacttcgatgacctgatcctgctgccggtggtg
ctgttccgtgaccatcccgaggtgctggcgcgctggcagcggcgcatccactacatgctg
gtcgatgagtatcaggacaccaacatcagtcagtatctgctggtgaagatgctgatgcag
gagcgtcagaccttcaccgtggtgggggacgatgatcagtccatctacgcctggcgcggt
gcgcgccccgagaacctcgtcaccctcggcgaggatttcccgcgcctgaatctgatcaag
ctggagcagaactatcgctccaccggcatcatcctgcgcgcagcgaacaccctgatcgcc
aacaacccgcacgtctacgacaagacgctgtggtcgcagatgggcgatggcgacccgatc
cgcatcatcatgaatcgcaacgaagaggccgaggccgagcgcgtggcgggggagatcctg
acgcggcgcatcaaggaaggcgccgagtggcgtgatttcgcggtgctctatcgtggcaac
ttccaggcgcgcctgctggagctgaagctgcagcattaccagattccctacaagctctcc
ggcggtacctccttcttcgggcgcaacgagatcaaggacgcgatggcgtatctgcggctg
ttgatcaatccggccgatgacaacgccttcctgcgcatcgtcaacgtgccgcgacgcgaa
gtcgggccgggcacgctggagaagctggccaactacgccaccgggcgtggcgtgtcactc
tacgccgcctgcagcgagatgggcctgcgcgagcagctcagcgagcgggcgctggaccgc
ctcggccgcttcacccacacgctggaccgcgtgcgccgcgagatggatgccggtcagtcg
atcagcgcgatccgcgagctgtttcatgaagtggattacgagggctggctgtatcagaac
gccagtgcccccaagatcgccgaacggcgcatggccaacgtctggatcctgatcgaccag
ctggagaagtcgatcagcggcaatccccaggaccaggtggaagagcttgaaggcagcgag
gcgatggtcggtgacaccgagaccggtgatgtcgcggcggccatctcacgtctggtgctg
cgcgacattctcgagcagcaggccgaggaggacgattcggaccgtgtgcagctgctgacg
ctgcatgcctccaagggcctggaattcccgcacgtctacgtgatggggctggaggaagac
ctgttgccgcaccgcaactccatcgagatggagacggtggaggaggagcgtcgcctcgcc
tatgtcggcatcacgcgggcacggcgcacgctggtgctgacactggcccggcagcgcaag
acctacggcgagatgatggactgtgtgccgagtcgcttcctggacgagctgccccccgag
gatctcgagtgggaagggcgtgccgacaagccgcaggatcaggagaagaaggtggcccgc
ggacgggatgccatcgcgggcctgcgttccctgctcggttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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