KEGG   Croceicoccus marinus: A9D14_08395
Entry
A9D14_08395       CDS       T04890                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cman  Croceicoccus marinus
Pathway
cman03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cman00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A9D14_08395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cman03019]
    A9D14_08395
   03016 Transfer RNA biogenesis [BR:cman03016]
    A9D14_08395
Enzymes [BR:cman01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     A9D14_08395
Messenger RNA biogenesis [BR:cman03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A9D14_08395
Transfer RNA biogenesis [BR:cman03016]
 Prokaryotic type
  tRNA degradation factors
   A9D14_08395
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 DUF2152
Other DBs
NCBI-ProteinID: ARU16213
UniProt: A0A1Z1FBW8
Position
complement(1777531..1779864)
AA seq 777 aa
MFDTKTVSIEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSSAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGETEADMVAMIAASAALTISGVPFMGPIGGCRVGFVDGEYTLNPKQDAALEDGRLDLVV
AATQEAVMMVESEAKELTEEEMLGAVMFAHDECRKVIGAIIDLAEQAAKEPWELNLADDK
SAMKEELRGLIGGDIAAAYKLTDKSARSNALNEARAKAKAHYAEADGQTQMTAGKQMKKL
EAEIVRTAILKEGARIDGRKLDQVRPIEAIAGFLPRTHGSALFTRGETQAICTTTLGTKE
SEQMIDGLEGLSYSNFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKED
FPYTIRILSDITESNGSSSMATVCGGCLSMMDAGVPIERPVSGIAMGLILEGDEFAVLSD
ILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITQEIMAKALEQAKAGRAHILGEMTKA
LGSARTELSAHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGIIKISSS
DVAQIEAARKWIEGIVEEAEVGKIYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGEELEDTRPAREPREPRGDRGDRG
GDRRGPRGGGDRGGRGGGGGRDRGPRGPRGDRDGGGSNGEGKEGGNPDHMPAFLKDD
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgttcgacaccaaaaccgtatcgattgagtggggcggaaagaccctcaccctcgaaacc
ggccgcattgcccgtcaggctgacggcgccgtgctggccacctatggcgaaaccgtggtg
ctttgcgccgtgaccgccgccaagagtgtgaaggaagggcaggacttcttcccccttacc
gttcactaccaggaaaaattctcctcggccggccgcattcccggcggcttcttcaagcgc
gaacgcggcgcgaccgagaaggaaaccctgaccagccgcctgatcgatcgtccgatccgt
ccgctgttccccgaaggtttctacaacgaaatcaacgtcatctgccaggtcctgtcgtat
gacggcgagaccgaggccgacatggtcgccatgatcgccgcgtccgcagcgctgacgatc
tcgggcgtgcccttcatgggcccgatcggcggctgccgcgtcggctttgtcgatggcgaa
tacacgctcaaccccaagcaggacgccgccctcgaagacggccgtctcgatcttgtcgtc
gccgccacgcaggaagctgtgatgatggtggaatcggaagccaaggagctgaccgaggaa
gagatgctgggcgccgtcatgttcgcgcatgacgaatgccgcaaggtcatcggcgcgatc
atcgacctcgccgagcaggctgccaaggagccttgggagctgaatctggccgacgacaag
tccgccatgaaggaagagctgcgcggcctgatcggcggcgatatcgctgctgcctacaag
ctgaccgacaagtcggcccgttcgaacgcgctgaacgaagcgcgtgcgaaggcgaaggcg
cattatgccgaggccgatggccagacgcagatgaccgccggcaagcagatgaagaagctg
gaagccgaaatcgtgcgtaccgccatcctcaaggaaggcgcgcgcatcgacggacgcaag
ctggaccaggttcgcccgatcgaggcgattgccggcttcctgccgcgcacccacggttcg
gcgctgttcacgcgcggtgagacgcaggcgatctgcaccaccacgctggggaccaaggaa
tcggagcagatgatcgacgggctggaaggcctgagctattcgaacttcatgctgcactac
aacttcccgccctattcggttggtgaagttggccggttcggcgctccgggtcgccgcgag
atcggacacggcaagctggcatggcgtgcgctgcatcccgtgctgccgtcgaaggaagat
ttcccctacaccatccgcatcctgtcggacatcaccgagtcgaatggctcgtcctcgatg
gcgacggtctgcggcggctgtctgtcgatgatggacgcaggcgttccgatcgaacgtccg
gtgtcgggcatcgcgatgggcctgattctggaaggcgacgagttcgccgtgctgtcggac
atcctcggcgacgaggatcacctcggtgacatggacttcaaggtggccggtacggaagcg
ggcatcacctcgctccagatggacatcaagattgccggcatcacccaggaaatcatggcc
aaggcgcttgagcaggcgaaggccggccgcgcgcatatccttggcgagatgaccaaggcg
ctgggttcggcccgcaccgaactgtcggcgcatgctccgcgtatcgagacgatgcagatc
gacaagtcgaagatccgcgacgtcatcggaaccggcggcaaggtgatccgcgagatcgtc
gccgaaaccggcgcgaaggtcgacatcgacgacgagggcatcatcaagatctcgtccagc
gacgttgcgcagatcgaagcggcccgcaagtggatcgaaggcatcgtcgaagaggcggaa
gtcggcaagatctacaacggcaaggtcgtgaacatcgtcgacttcggcgcattcgtgaac
ttcatgggcggcaaggacggtctcgtccacgtctccgaaatgaagaatgagcgcgtggaa
aagccgaccgacgttgtgtcggaaggccaggaagtgaaggtcaaggtcctcgagatcgac
aaccgcggcaaggttcgcctgtcgatgcgcgtcgtcgaccaggaaaccggcgaagagctg
gaggacacgcgtccggcccgtgaaccccgcgagcctcgtggtgatcgcggcgatcgcggc
ggtgaccgtcgtggcccgcgtggcggcggcgatcgcggtggacgcggcggcggcggcggt
cgtgaccgcggaccgcgtggtccgcgcggcgaccgtgacggcggcggcagcaacggcgaa
ggcaaggaagggggcaaccccgaccacatgcccgcgttcctgaaggacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system