KEGG   Croceicoccus marinus: A9D14_12015
Entry
A9D14_12015       CDS       T04890                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
cman  Croceicoccus marinus
Brite
KEGG Orthology (KO) [BR:cman00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cman03009]
    A9D14_12015
   03016 Transfer RNA biogenesis [BR:cman03016]
    A9D14_12015
Enzymes [BR:cman01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     A9D14_12015
    5.4.99.29  23S rRNA pseudouridine746 synthase
     A9D14_12015
Ribosome biogenesis [BR:cman03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A9D14_12015
Transfer RNA biogenesis [BR:cman03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    A9D14_12015
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ARU16763
UniProt: A0A1Z1FDH4
Position
2521548..2522249
AA seq 233 aa
MNTIEILFEDGEALVIDKPAGLPVERPRAGGPSLEDHLDTLRLGFQREPVPVHRIDTDTS
GCLLLARNPKALKRFSAAFEARAVTKHYIGLVAGELADEEGTIALSLSKISSAEKGWRMI
AAKKGKPSVTHWKKLGVKDGVTAVAFAPETGRTHQIRIHALAGLGFPLLGDPVYGDGKGA
GRTMLHASELVVQREGKDPISAIAPLPADFARLCPDIPESIEWPAGKEWPAEA
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaatactatcgaaatcctgttcgaggacggcgaagcgctggtcatcgacaagcccgcc
ggccttcctgtcgagcgtccgcgcgcgggcgggcctagccttgaagatcatctcgacacg
ctgcggctgggattccagcgcgaacccgtgccggtgcaccggatcgacaccgacacgtcg
ggctgcctgctgctggcgcgcaatcccaaggcgctgaaacgcttttccgccgcgttcgag
gcgcgggcggtgaccaagcactacatcggcctggtcgcgggcgaactggcggatgaagag
ggcaccatcgcgctgtcgctgtccaagatcagcagcgccgaaaagggctggcgcatgatc
gcggcgaaaaaaggcaagccttcggtcacccactggaagaagctgggcgtgaaggatggc
gtcactgcggtcgctttcgcgccggaaaccggccgcacccaccagatccgcattcatgca
ttggcaggtctgggtttcccgctgctcggcgatccggtctatggcgatggaaagggcgca
ggccgcaccatgctgcatgcgtccgaactggtcgtgcagcgcgaaggcaaggacccgatc
agcgcgatcgcacccttgcccgccgatttcgcgcggctctgccccgacattccggaatcg
atcgaatggccagcgggtaaagaatggccggcggaggcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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