KEGG   Cucurbita maxima (winter squash): 111472745
Entry
111472745         CDS       T05246                                 
Name
(RefSeq) spastin
  KO
K13254  spastin [EC:5.6.1.1]
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmax04131]
    111472745
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmax04812]
    111472745
Enzymes [BR:cmax01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     111472745
Membrane trafficking [BR:cmax04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    111472745
Cytoskeleton proteins [BR:cmax04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     111472745
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 Vps4_C AAA_22 AAA_14 AAA_16 DUF815 TIP49 Mg_chelatase nSTAND3 TniB AAA_2 RNA_helicase IstB_IS21 AAA_25 AAA_30 MIT AAA_24
Other DBs
NCBI-GeneID: 111472745
NCBI-ProteinID: XP_022974154
UniProt: A0A6J1IGS0
Position
Unknown
AA seq 503 aa
MSFFRGVAEYIGSIFSEVSSIHDLSQNRGRESASTMEGVNGIPVSNERYASKLKGYFDLS
KEEIAKAVRAEEWGLIDDAILHYQNAQRILAEASSTTVPSSISSSEQEKVKSHRQIWSCN
NLIYFIHDVLGFGHLITYNLSLIFLSSNSGVTSSNKSSSNQVPRAGVASTMPKIKKPVLK
SSLGASNPITRSQPASVGTSKSMQEASDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKA
KQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAAS
LTSKWVGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEASRRLKSEFLVQFD
GVTSNSTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDGNGRRLLLKHKLKGQSFSLP
SRDLERLVTQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQIRSLKYEDFQEAMKV
IRPSLNKSRWQELEQWNQSFGSN
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgagttttttcagaggtgtagctgaatatattggatcgatcttctcagaagtgagctca
attcacgatttgtcgcagaatcgtggccgcgagagtgcttcaaccatggagggcgttaat
gggattcctgtttcgaacgagcgctatgcttccaagctcaaagggtacttcgatttgtcc
aaggaggagatcgccaaggccgtcagagcggaggagtggggcttgatcgacgatgccatc
ctgcactaccagaatgcgcagcgtattctggccgaggccagttcaaccaccgtgccctcg
tctatcagttctagcgaacaagagaaggtgaaatctcatagacaaatctggtcttgtaat
aacttaatctatttcattcatgatgttcttggtttcggacatttgataacttataatcta
tctcttatttttctatcttctaattcaggtgttacatcctcaaacaagagctcctcgaat
caagtgccaagagctggagttgcttcaacaatgccaaaaattaaaaagccagtgctaaag
agctctcttggtgcaagtaatccaataacgagaagtcaaccagctagtgttgggacttca
aaatctatgcaagaagcttctgatggatacgatccaaaattggttgaaatgataaatact
gctatagtggatcggagtccttctgtgaaatgggatgatattgctggacttcaaaaggca
aagcaagctttattggagatggttattttgcccacaaagagaagagacttattcactggt
ctccgaaagcctgctagaggtcttcttctctttggtccccccggtaatgggaagactatg
cttgctaaagccgtagcttcagaatcagaagctactttttttaacgtgtctgctgcgtcc
ttaacatcaaaatgggtaggggaaagtgaaaaacttgttcggactctcttcatggttgct
aagtccaggcagccctccgtaattttcatggatgaaattgatagtgtcatgtcaacaaga
catgctaatgaaaatgaagctagcaggaggctgaagtctgagtttctagtacagtttgat
ggagtaacatccaattctactgatctcgtaatcgttattggtgctactaataagccacaa
gaactggatgatgcagttctcaggagattggtgaagagaatttacattcccttgccagat
ggaaacggtagaagacttcttctcaagcacaagctcaagggacagtcattttctctacca
agtagagatctagagagactagttacacagactgaaggatactcgggaagtgatctacag
gccttgtgcgaggaagctgcaatgatgccaattagggagctaggtgggaacattctcaca
gtaaaggcagatcagataagatcattaaagtacgaagatttccaggaggcaatgaaagtg
atcaggcccagtctaaacaaaagcaggtggcaggagcttgaacaatggaaccaaagtttt
ggatccaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (33)   

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