KEGG   Cucurbita maxima (winter squash): 111478265
Entry
111478265         CDS       T05246                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03030  DNA replication
cmax03410  Base excision repair
cmax03420  Nucleotide excision repair
cmax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111478265
   03410 Base excision repair
    111478265
   03420 Nucleotide excision repair
    111478265
   03430 Mismatch repair
    111478265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmax03032]
    111478265
   03036 Chromosome and associated proteins [BR:cmax03036]
    111478265
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111478265
DNA replication proteins [BR:cmax03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111478265
  DNA Replication Termination Factors
   ELG1-RFC complex
    111478265
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111478265
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111478265
  Check point factors
   HRAD17(Rad24)-RFC complex
    111478265
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rad17 Sigma54_activ_2 DNA_pol3_delta DUF815 ABC_tran AAA_22 RsgA_GTPase AAA_5 AAA_29 RuvB_N AAA_23 AAA_2 T2SSE Mg_chelatase nSTAND3 nSTAND1 FtsK_SpoIIIE TsaE SprT-like RNA_helicase
Other DBs
NCBI-GeneID: 111478265
NCBI-ProteinID: XP_022978217
UniProt: A0A6J1IKJ1
Position
Unknown
AA seq 354 aa
MLWVDKYRPKTLDQITVHEDVAQNLKKLVTEQDCPHLLFFGPSGSGKKTLVMALIRQMFG
ASAEKVKVENKTWKVDAGTRNVEIELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKN
RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
CLNVRINGPTDDEIVKVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY
PFVSNQAIPPMDWEEYISEIASDIMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctgtgggtcgacaagtatcgtccaaaaaccctagatcagatcacagttcatgaagat
gtagcacagaatcttaagaaactggttaccgagcaggactgccctcatttgctcttcttt
ggcccctctggttccggaaagaaaaccctagtcatggcgcttatccggcagatgtttgga
gcaagtgcggagaaggtgaaggtggagaataaaacctggaaagttgatgctggaactaga
aatgttgaaatagagttaaccaccatatcaagtacaaaccacgtcgagctcactcccagc
gatgcaggtttccaagataggtatattgttcaagagataatcaaagatatggcgaaaaac
agacccattgactccaaagggaaaagaggacataaagttttggttctaaatgacgttgac
aaactatccagagaagcacagcactctcttaggagaacgatggagaaatatagctcgtat
tgtaggttaatactttgctgcaatagttcatcaagagtaactgaagcaatccgttctcgc
tgcctaaatgtgcggataaatggaccaacagatgatgagatcgtcaaggtactagagttc
attgggaagaaagaaggactgcaacttccatctggatttgcttcccgcattgcagaaaaa
tcaaaccggagtttgaggagagctatactatcattcgagacttgtcgtgttcaacagtat
ccttttgttagtaaccaggcaataccgccgatggattgggaggagtacatctctgagata
gcgtctgacataatgaaggagcagagccccaagagactgtaccaggttcgtgggaagtta
tatgaactactggttaattgtattccaccagagatcatattgaagaggctgctttatgag
ctgctcaagaaattggatgctgaattaaagcatgaggtctgtcattgggctgcatattat
gaacacaggatgcggcttggccagaaatccatcttccatattgaagcttttgtggcaaag
ttcatgagcatatacaagagtttcctcatttcaacgttcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (38)   

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