KEGG   Cucurbita maxima (winter squash): 111479026
Entry
111479026         CDS       T05246                                 
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03013  Nucleocytoplasmic transport
cmax03015  mRNA surveillance pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111479026
  09122 Translation
   03013 Nucleocytoplasmic transport
    111479026
   03015 mRNA surveillance pathway
    111479026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111479026
   03041 Spliceosome [BR:cmax03041]
    111479026
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111479026
Spliceosome [BR:cmax03041]
 Complex C
  Other components
   EJC/TREX
    111479026
SSDB
Motif
Pfam: RSB_motif SAP SAP_new25
Other DBs
NCBI-GeneID: 111479026
NCBI-ProteinID: XP_022979241
UniProt: A0A6J1ISQ5
Position
Unknown
AA seq 726 aa
MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENAEETN
GVDDAPPVTDSDNNQEHASIVSETTKETSEDATMIEKVDGDEVQVEKNGSTAAVDEGILQ
DGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKPQSEV
EESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNKNLKSQDANLGHDSSDPDNQVSEV
SPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPDAGES
HPMDVEEPPVNKNVEESPANRDVLEAPVNKDVVDSFVKDVVQPFVKEDVEEKHDIKDMIT
DLHEKHDDVDVGLSEKLNLDRSSGDDSIEDAMEIKTDSGNNPEEMGEKNVKIEGPISKEE
KFADIAVRGSTADKKNLDIESDVSSLPAEKRKMLDQVGAGNTESVKRHRRWNAENLKIPE
PQNAVHTSTSNSKDILQSPAPKRNFSRSDSTASEDPSKERVVLPSPKPPTNSLRIDRFLR
PFTLKAVQELLSKTGSITSFWMDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLI
AEFVDPQEVKIRVGAPQTPTPATVAPPVSTMPPPKQPEPSPRLPRQQHAPPPSLPPPPPT
NNLPQVREQLPLPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQGKLAAGR
GKDIKQ
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgtcttccaaatcgaaatatccaattctcgaaaatcgaccgattgatcagtggagggta
acggagttgaaagacgagcttaagagacggaaattgcccatcagaggtctgaaggaagat
ttgatcaaacggttggatgaatcacttcgaattgaaagggaaaatgccgaggaaaccaat
ggtgttgatgatgcccctccagttacagatagtgacaataaccaagagcatgcatctatt
gtttctgaaacaacgaaagaaacaagtgaagatgctaccatgattgagaaggtggatggt
gatgaagttcaggttgagaagaatggcagtactgcagctgtggacgaagggatacttcaa
gatggggttagcctcaatggttcacctagggtggaagaggggtcggctgtccatgttact
actctggaaactaatgttaccgtagctgaaactgtggcaactgaaggagcgttaagtgtt
gaaggcttgcaaaacatggaaaccaaggataacgaggattcaaagccccagtcggaggtt
gaggaatccaagtcccagctggatagtaaggattcaaagcttcagatggaaattgaagat
acacagccccagcttgttgatgtgaatatggaggcccaggtgaagaataagaatttgaag
tctcaagatgcaaatctcgggcacgactcttctgatccagacaaccaggtatctgaggtc
agccctgttatagggtctcaagtaagaactgattctatttctactgattctgtgacaatt
aatgaaatgattgaactaaaggaaaatatatctgctgaccatgtaaaattagaactagat
gttaagcaggagatggtggaaccatcatccagcattgttgtcccagatgctggcgaatca
catccaatggatgttgaagagccacctgtgaacaagaatgttgaagagtcacctgcaaac
agagatgttctggaggcacctgtgaacaaagatgttgtagattcttttgtgaaagatgtt
gtacagccctttgtgaaagaagatgttgaggagaaacatgatattaaggacatgattact
gatcttcatgaaaaacatgatgatgtagatgtggggttatctgaaaagctaaatttagat
agaagttctggggatgattcaatagaagatgctatggagattaaaaccgattcagggaat
aatcctgaagaaatgggagagaagaatgtaaaaattgagggccctatatcaaaagaggaa
aagtttgcagacattgcagtgcgaggctcaactgcagacaagaagaatcttgatatagag
agtgacgtttcatctttgcctgctgaaaaaagaaagatgcttgatcaagttggggctgga
aatactgagtccgtaaagagacatcgtaggtggaatgctgaaaacctcaaaattccagag
ccccaaaatgctgttcatacatcgactagtaattcaaaggacattcttcaatcacctgct
ccaaaacgcaacttttccagatctgactccacagctagtgaagatccatcgaaggaacgt
gttgttctaccatcaccaaaacctcccacaaattcactaagaatcgatcgttttctgcgt
ccatttaccctcaaagctgtgcaagaacttctgagtaagactggtagtatcaccagtttc
tggatggatcacattaagacgcattgctatgtaacttactcatcggtggaagaagccatg
aagaccagagatgctgtttacaatctgcaatggccaccaaatggtgggcgccttcttata
gctgagtttgttgatcctcaagaagtaaaaattcgagtgggagctccacagacccctaca
cctgcaacagttgctccaccggtctctaccatgcctccacccaagcaacctgagccttct
cctcgtctaccaaggcagcaacatgctccaccaccttctcttccaccacccccacccaca
aacaaccttcctcaagtaagggagcagcttccactcccacccccgcctgctcttcctgat
aaagttgacactcctattgtcaccttggatgacctcttcaggaaaaccaaagcaactcct
cgcatctactatttacctttatccgatgaacaggtgcagggaaaacttgcagcaggaagg
ggaaaggacattaaacagtaa

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