KEGG   Cucurbita maxima (winter squash): 111488070
Entry
111488070         CDS       T05246                                 
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
  KO
K13217  pre-mRNA-processing factor 39
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111488070
Spliceosome [BR:cmax03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    111488070
SSDB
Motif
Pfam: TPR_14 Suf TPR_7 TPR_MalT NRDE-2 TPR_11
Other DBs
NCBI-GeneID: 111488070
NCBI-ProteinID: XP_022991458
UniProt: A0A6J1JWA1
Position
Unknown
AA seq 831 aa
MGDSETVVAQTSDVMGYASAGYVSSGYSDSSSNLIPQPGAFQSGITGDFSVSHTSADMGS
GNAYVTDPNSIQQGNHVGVVDATKSDVVMTDHSQNAAVSETSGMETAEVASHDSSLNGSV
AASSVNASSIENGNVIENANDDSEEQHFIDGSVPPLSAEEDRLWNIVRASSLDFNAWTSL
IEETEKVAEDNILKIRRVYDAFLVEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
TYSVDIWLHYCIFALSTYGDPETIRRLFERGLAYVGTDYLSFSLWDKYIEYEYMQQEWGR
LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAAVDVQSEVGDQVNGEEGRP
DVTEPSFKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
AELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNAL
ARASQVFVKRQPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRL
GKLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREIMDKAVEHGEL
SKPLIEALIHYEAIQSSAKRIDYLDSLVEKVIVPNAENAMVVSASMKEELSSIFLEFLNL
FGDVQSIKKAEDRHAKLFISYKSTSELKKRLADDYLASEKAKIAKSYPSVSSPAQSLMGA
YPTGQNQWAAGYSVQPQAWPPVAQAQGQQWASGYTQPASYSGYGSTYTNPQVSTSVSQAS
TYATYPPTYPVQPQVYSAQSYAQPTAQATIAPSQQPASVAQPYYGSYYMNG
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgggggacagtgaaactgtagttgcccaaacatctgacgtcatggggtatgcatctgct
ggatatgtttcgagtggctattctgatagcagttcaaatctaattcctcaaccgggtgct
tttcaatctgggatcactggggacttttctgtttcacatacctctgcagatatgggcagc
ggcaatgcatatgttacggatcccaattctattcagcaaggaaatcatgttggggtggtg
gatgcgacaaagtcagatgtggtaatgactgaccatagtcagaatgctgctgtatcagaa
acttcaggaatggaaactgctgaagtagccagtcacgattcttctttaaatggaagtgtt
gctgcctcatcagttaatgcttcatcaattgagaacggaaatgttattgagaatgccaat
gatgattctgaggaacaacacttcattgatggttctgtacctccactatctgcggaagaa
gatagactctggaacattgtgagggccagttctttagattttaatgcatggacttctttg
atcgaagagacggagaaggtggcagaggataacatactcaaaattcggagagtgtacgat
gcatttttagtagaatttcctttatgctatggttattggaagaagtatgcagatcatgag
gcccgttttggatctactgacaaagttgttgaggtgtatgaacgagcagtacatggagtc
acttactcagttgatatttggctgcattactgcatattcgctcttagtacatatggagat
ccagagaccatcagaagactttttgagagaggattagcttatgttgggacagattacctc
tcattttccctttgggataaatatattgaatatgagtacatgcagcaggagtggggtcgc
cttgccatgatatatacacgtatactggaaaatccaaatcaacagttggatcgttatttc
aatagttttaaggagttagctgcaagtcgaccattgtcagaattgaagagttctgaggag
gctgctgtcgatgtgcaatcagaggttggtgatcaagtaaatggggaggaaggtcgtccc
gatgtcacggaaccatcgtttaaaactgtaagtgctggcttaacagaagcagaggagttg
gagaagtatatcgccattagagaagaaatctataagaaagctaaagagttcgattctaag
atcattggttttgaaacagctatcagaaggccctactttcacgttcggccactaaatgtt
gcagagcttgataattggcatagttacctggactttatagaacaagaaggagacttaaat
aaggtggtgaaattatacgagagatgtgtgattgcttgtgccaactatcctgagtactgg
atacgatatattttatgcatgcaagcaagcgatagtatggatcttgccaacaacgccctt
gctcgggcaagccaagtttttgtcaagagacaaccagagatccatttatttgctgctcgg
ttcaaggagcaaaatggggatattgctggcgctcgagcctcctatcaacttgtgcatact
gaaatttcacctggccttcttgaagcaattattaagcacgctaatatggaacatcgtctg
gggaagctggaagatgcatactctgtatatgaacaggccatcgccattgaaagaggaaaa
gaacattctcgtgcgttgccactgttatatgctcagtactcaaggtttctgaacttggta
tgtaagaatgaaggaaaagctagagaaattatggacaaggcggttgagcatggtgaatta
tccaaaccactcattgaggccttgatacattatgaggcaattcagtcatcagcaaagaga
attgattatttagattcattagttgagaaggtaatagtgcccaatgcagagaatgcaatg
gtcgtgagtgcttcaatgaaggaggagttatcgagcattttcttggagtttctaaatctc
tttggagacgttcaatcaatcaagaaggctgaggacagacatgcaaagttattcatttca
tataagagtacatcagaacttaaaaaacgcctggcggatgattatctagcttctgaaaaa
gcaaagatagccaaatcctatcctagtgtttcttcaccagcacaatctttgatgggtgct
tatcctactggtcaaaaccagtgggcagccggctatagtgtacaaccacaagcctggcct
cctgtcgctcaagcacaggggcaacaatgggcatctggttacacccaaccggcctcgtat
agtgggtatggaagcacctacacgaatccacaagtgtccacatcggtgtcacaagcctcc
acttatgcgacgtatcctccaacataccctgtccagccgcaggtgtattctgctcagagt
tatgcccaaccgaccgctcaagcaacgatagcaccatcacagcagccagcttcagtcgct
cagccatattacgggagttactatatgaatggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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