KEGG   Cucurbita maxima (winter squash): 111489179Help
Entry
111489179         CDS       T05246                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
cmax04141  Protein processing in endoplasmic reticulum
cmax04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111489179
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111489179
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111489179
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmax01009]
    111489179
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111489179
   03009 Ribosome biogenesis [BR:cmax03009]
    111489179
   03110 Chaperones and folding catalysts [BR:cmax03110]
    111489179
   04131 Membrane trafficking [BR:cmax04131]
    111489179
   03051 Proteasome [BR:cmax03051]
    111489179
   03029 Mitochondrial biogenesis [BR:cmax03029]
    111489179
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmax04147]
    111489179
Protein phosphatases and associated proteins [BR:cmax01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     111489179
Spliceosome [BR:cmax03041]
 Complex B
  Other components
   Prp19 complex
    111489179
 Complex C
   Prp19-CDC5 complex
    111489179
Ribosome biogenesis [BR:cmax03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    111489179
Chaperones and folding catalysts [BR:cmax03110]
 Heat shock proteins
  HSP70 / DNAK
   111489179
Membrane trafficking [BR:cmax04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    111489179
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    111489179
Proteasome [BR:cmax03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    111489179
Mitochondrial biogenesis [BR:cmax03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    111489179
Exosome [BR:cmax04147]
 Exosomal proteins
  Proteins found in most exosomes
   111489179
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C Hydantoinase_A
Motif
Other DBs
NCBI-GeneID: 111489179
NCBI-ProteinID: XP_022993045
Position
Unknown
AA seq 649 aa AA seqDB search
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPLNTVFDAKRLIGRRFSDPSVQSDVKLWPFKLIAGPGDKPMIVVNYKGEEKQFAA
EEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TSITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPAKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEDHKK
KVESKNALENYAYNMRNTIRDEKIGGKLAPEDKKKIEDAVQEAIQWLDSNQLAESDEFDD
KMKELESICNPIIAKMYQGGADMGGAGAGMDDDAPSGGSGAGPKIEEVD
NT seq 1950 nt NT seq  +upstreamnt  +downstreamnt
atgtcgggaaaaggagagggtccggctatcggtatcgatctcggtaccacttactcttgt
gttggagtttggcaacatgatcgtgttgagattattgccaatgaccaggggaatcggacg
acgccgtcgtatgttgcattcactgacaccgagcggctcatcggcgacgctgccaagaac
caggtcgctatgaatcctctcaacaccgtcttcgatgcgaaacggttgattggaaggaga
ttctctgacccctcggtccagagcgatgtgaaactatggccattcaagctcatcgctggt
ccaggtgacaaaccgatgattgtcgtcaattacaaaggcgaagagaagcagttcgccgct
gaggaaatctcatccatggtcctcacgaaaatgcgtgagatagcagaagcttacctcggt
tcctccgtaaagaacgccgtagtcaccgttcctgcttacttcaatgactctcagcgtcag
gccaccaaggatgctggagtcattgccggcctaaatgtcatgcggatcatcaacgagcct
actgcagcagctattgcttatggactcgacaaaaaggccaccagtgtcggcgagaagaat
gtactgatatttgatttgggtggaggaacatttgatgtctctctcctcacaattgaggaa
gggatttttgaggtgaaggcgactgctggtgacacccatctcggaggtgaagacttcgac
aacagattggttaaccatttcgtacaggaattcaagaggaagcataagaaggacatcagt
ggaaatccgagggctctcagaagattgaggactgcttgtgagagggccaagaggaccctt
tcatcgactgcccaaacgacaatcgagattgattctttgtatgagggaattgatttctat
acatccatcactcgtgctagattcgaagagctcaacatggacctgttccggaagtgtatg
gagccagttgagaagtgtctgagagatgcaaagatggacaaaagcagcgtccatgatgtt
gtccttgttggtggttctacgaggattcctaaggtgcagcagctgttgcaggatttcttc
aatggcaaggaactctgcaagagtatcaaccctgacgaggcagttgcttatggagctgct
gttcaagctgctatcttgagtggcgaaggaaacgaaaaagtgcaggatcttcttcttttg
gatgtcactcctctgtccctaggtttggagactgcaggaggtgtcatgacagttctaatc
ccaaggaacaccactatacctgccaagaaggagcaagtgttctctacttactcagacaac
caacccggtgttcttattcaggtctacgagggcgagaggacaagaaccaaagacaacaac
ttgttgggcaagtttgaactctctggcatccctcctgctccaagaggtgttcctcagatc
accgtttgcttcgacatcgacgccaatggcatcctaaatgtttctgccgaggacaaaacc
accggacagaagaataagatcacaattaccaacgacaaaggaaggttgtccaaagaagag
attgagaaactggttcaggaagcagagaaattcaaggccgaggatgaggatcacaagaag
aaagtggaatcgaagaacgcattggagaactatgcatacaacatgaggaacacgatcaga
gatgaaaagatcggtggtaaacttgcaccagaagataagaagaagatcgaggatgcagtt
caagaggccattcaatggctagacagcaaccagctggctgagtcggatgaatttgatgac
aagatgaaggaacttgagtccatttgcaaccccattatagccaagatgtatcaaggtggt
gctgacatgggcggcgccggcgccggcatggatgacgatgccccttctggcggaagcggc
gctggtcctaagattgaagaagttgattag

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