KEGG   Cucurbita maxima (winter squash): 111489424
Entry
111489424         CDS       T05246                                 
Name
(RefSeq) probable RNA helicase SDE3
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111489424
   03036 Chromosome and associated proteins [BR:cmax03036]
    111489424
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111489424
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     111489424
SSDB
Motif
Pfam: AAA_11 MOV-10_beta-barrel
Other DBs
NCBI-GeneID: 111489424
NCBI-ProteinID: XP_022993387
UniProt: A0A6J1JSN2
Position
Unknown
AA seq 734 aa
MWMIINFLRRIFGIDRPENDNRGKARQIRVFASSYTGSKSEFDKGGYSRRFHPSRYQLSQ
SVISIKIRPNYGRPMRDLIKEPKSLFESLVKTHTVRPSASIKNSESSSKSAVKTYATGQS
TSIEKLKSTSTVVGQFDSVKASESVSVSIASEPSSEFIAKTYATAQSTSVNKSESVRVSR
ASEPSSEFISNIYATAQSTSNKKSVSDSPSRASISSSNFFVTTHITGKSASPKPAVHLPE
VTAEPPSTSNPTLRPVSGHGRNQSAYILEANSSLALYLIPKDVEELIKNDVVPPVLRYPV
CPVTYKSYFAALLYAEDSYCKKWSDYKLESVNLELQAIAIRKQANRQGRINGDENFYKTF
AAFEFDSVPERRPFLLSRDLVYARLSGTDDEPFQGFVYRVSSSHRSRKGRVLLVDFGEDF
YEWHHETNKYDISFTFNRVCLKRAHQAIEEASDSLFQNILFPESMSRTRHPTIQVTHSTH
QRLDPAQNNAVHHILNLHSSPPYLINGPLCIHVNDWARNRTFELSRTGTIIKEAVIQIYS
TSPNCRILICAPKNSTCDELMISLKKVIPESNMFRAIAAFRERDEVPYDILSSCYYNEDE
ECFSSPILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLVDASAAIEPETLVPLTKF
ATNATSVIVTGQTGNQPNYVRSTIGRRNGLKTSYFERLEVSLPYIDLNPQFISGLEEQPG
SNGEVVGFIGTYMY
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgtggatgattataaattttctgcgtcgcatttttgggatcgatcgtcccgagaatgac
aatcgtggaaaagctcggcagattcgcgtttttgcaagctcttacacgggatcgaaatcg
gagttcgacaaaggcggctattcgagaaggtttcatccgagtaggtatcagttaagccaa
tcagttatatcaatcaaaattcgtccgaattacggtaggcctatgagagatttaattaag
gaacctaaatctctgtttgagtcgcttgtgaagacacatacagtcagaccatcggcttca
attaagaactcggaatcttcgtccaagtccgcagtgaagacatatgctaccggacagtcg
acttcaatcgagaaactgaaatcgacgtctacggtcgtcggacaatttgattcagttaag
gcatcggaatccgttagcgtttcgatagcttcagagccttcttctgagttcattgcgaag
acatacgccaccgcacagtcgacttcagttaacaaatcggaatccgtcagggtttcgaga
gcttcagagccttcttctgagttcatctcgaatatctacgccaccgcacagtcgacatca
aataagaaatcggtatcagatagtccttcgagagcttcaatttcttcatcgaatttcttc
gtgacaacacatattaccggtaaatcggcttctcctaaaccggcggtgcatctgcctgaa
gttaccgccgagccaccgtcgacctcgaacccgactctgcgtccagtttctggccatgga
agaaatcagtcggcgtacattctggaggcgaacagttccttggccttgtacttaattcct
aaagacgttgaagagttgataaaaaacgacgtcgttcctccagttctgagatatcccgtt
tgtcctgtgacttacaagtcttattttgctgctcttctctacgccgaggactcttattgt
aagaaatggagcgactacaaattggaaagcgtgaatttagagctccaagcaattgcgatt
cgtaaacaagcaaataggcaagggagaatcaacggcgatgaaaatttctataaaaccttt
gcggcatttgagtttgattcagttcctgagaggcggccgtttctactgtcgagggatttg
gtctacgcacgactctccggtaccgatgacgagccatttcagggtttcgtctatcgagtt
tcttcgagtcataggtcgaggaagggaagggttcttttggttgattttggagaagatttt
tatgaatggcatcatgaaaccaacaaatatgatatcagtttcactttcaacagagtttgt
ttaaaaagagctcaccaagccatagaagaagcatctgattcattgttccagaatatcctt
tttcctgaatccatgtcaagaacaagacatcccaccattcaagttacacattctacccat
caacgtcttgatcctgctcaaaacaatgcagtccatcacattttgaaccttcatagctca
ccaccttatctgatcaacggtccactgtgcatacacgtcaacgattgggcccggaatcga
acgttcgagctttcgagaacgggcacaatcattaaagaagcagtgattcagatttactca
acctctcccaattgcagaatcctaatctgtgctcctaaaaactcaacatgtgatgagctg
atgatatctttgaagaaggtgattcccgagtccaacatgtttcgtgctatcgccgctttt
cgagagcgagacgaggtaccatatgacatattgtcttcgtgttattacaacgaggacgag
gagtgtttcagttctccaatactcgacaagctccgcgaatacaagattatattctcgacg
tatatgagtagcttccgcctacatgctaaaggcttggctgctggacatttcaaccatatt
ttcttggtcgatgcatcggcagctatcgagcccgagacgttggtgcctttgactaagttc
gctacaaatgcaaccagtgttatagttactggacagacagggaaccaacctaattatgtt
cggtcaacaatcggtcgaagaaatggattgaagacatcctattttgaaagacttgaggta
agcttgccatatatagaccttaatcctcagttcatttcaggcttagaggaacagccagga
agtaatggcgaagttgttgggttcattggtacatatatgtattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system