KEGG   Cucurbita maxima (winter squash): 111491100
Entry
111491100         CDS       T05246                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111491100
   03041 Spliceosome [BR:cmax03041]
    111491100
   03036 Chromosome and associated proteins [BR:cmax03036]
    111491100
Enzymes [BR:cmax01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111491100
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     111491100
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111491100
Spliceosome [BR:cmax03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    111491100
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    111491100
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 111491100
NCBI-ProteinID: XP_022995615
UniProt: A0A6J1K4F8
Position
Unknown
AA seq 619 aa
MRTSWADLAASPAAENVAAGSSANNCSAGTTSAPGRSTYVPPHLRNRPASSDPPAAANSG
PAAGNDRSGHVGSRWPGPKNDYNRSGYGGGSRGGGWGSRGGGWDRGRGDREINPFEDEDD
TDPAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTP
VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSVQRPARGARTVYPLALIL
SPTRELSMQIHEEARKFSYQTSVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE
RAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQRL
ASDFLSSYIFLAVGRVGSSTDLIAQRVEFVHESDKRSHLLDLLHAQRANGVQGKQSLTLV
FVETKKGADALENWLCHNGFPATTIHGDRTQQEREHALRSFRSGNTPILVATDVAARGLD
IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGVATAFFNENNSSIARSLAELMQESNQE
VPDWLSRFAARSSYSGGRNRRSGGGRFGSRDYRRDSTFNRGGSDYHSGGNTGSGGGYGGG
VPGGYGGGYGGSGVTSAWD
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcgaacttcctgggcagatttggccgcaagtccggctgctgagaacgtagctgctggt
tcttctgctaacaattgtagtgctggaactacttcagcacctggccgatcgacctatgtt
ccaccacaccttcggaatcgccctgcctcttccgacccgcctgctgcagcaaatagtggg
cctgctgcgggaaacgatcgatctggtcatgtagggtcccgctggcctggtccaaagaac
gattataatcgttctggttatggtggtggcagtcgtggaggtggatggggaagtagagga
ggtggatgggatcgtgggaggggggaccgtgaaatcaacccatttgaagatgaggatgat
acggatccagcatttggagaacaagaaaatactggtataaattttgatgcttatgaagat
attcctgtggaaacaagtggtgaaaatgtaccacctccggtgaatacatttgctgaaatt
gacttgggtgaagcacttaatcaaaacattcggcggtgtaagtatgtaaaaccaactccc
gtccagcggcatgctattcctatctcccttgcagggagagacttgatggcttgtgctcag
actggatctggaaagactgctgccttttgtttccccattatcagtggcataatgaagggc
caaagtgtgcagagaccagcccgaggtgcacgcacagtgtacccacttgcacttattctc
tccccaactagggagctttcaatgcaaatacatgaagaagcaaggaaattctcttatcaa
acaagtgttagagtggtggttgcttatgggggtgcaccaatcaaccaacagctacgtgaa
ctagaaagaggtgttgatattcttgttgcaactccgggaagattggtagatttgcttgaa
agggcaaaagtttcactgcagatgataagatacttggcccttgatgaagcagatcgcatg
ttagatatgggatttgagcctcaaattaggaaaatagtagagcaaatggacatgcctcca
cctggtgtaaggcagactatgctgttcagtgcgacttttccaagggaaattcagagacta
gcctctgattttctttcaagttatatatttctggctgtgggaagagtaggttcaagtact
gatctaattgctcaaagagttgaatttgttcatgaatctgataagagaagtcatttattg
gaccttcttcatgctcaaagggctaatggtgtgcaaggcaagcaatctcttactttggtt
tttgtggagacaaagaagggagctgatgctcttgaaaattggttatgtcataatggtttt
cctgccactactattcatggtgatagaacacaacaggaaagagaacacgcattaagatcc
tttagaagtgggaacacaccaattttggtggcaactgatgtagctgcccgtgggcttgat
attcctcatgttgcacatgtagtgaactttgatctccccaatgacattgatgattatgtt
catagaattggacgaacggggagagctgggaagactggtgtagcaactgccttttttaac
gagaacaattcatccatagcaaggtccttggctgaacttatgcaagaatctaatcaagaa
gttcctgattggctatcacgatttgcagccaggtcttcgtacagtggaggcagaaaccgt
cgttcagggggaggccgatttggtagccgtgactatcgaagggattccactttcaacaga
ggtggttctgattatcatagtggaggcaacaccggcagtggtgggggttatggtggtggt
gttcccggtggatatggaggaggatacggtggttcaggggtgactagtgcatgggactaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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