KEGG   Cucurbita maxima (winter squash): 111499559
Entry
111499559         CDS       T05246                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmax04131]
    111499559
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmax04147]
    111499559
Membrane trafficking [BR:cmax04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    111499559
Exosome [BR:cmax04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111499559
  Exosomal proteins of bladder cancer cells
   111499559
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40 zinc_ribbon_9
Other DBs
NCBI-GeneID: 111499559
NCBI-ProteinID: XP_023006913
UniProt: A0A6J1L696
Position
Unknown
AA seq 1220 aa
MLTKFETKSNRVKGLSFHSRRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILTAHP
EMNLLAAGHDSGMIVFKLERERPAFATSGDSLFYVKDRFLRLYEFSTQKDSQVIPVRRPG
STSLNQSPRTLSFSPTENTVLICSDLDGGCYEFYTITKDSFGRSDSFQDAKRGLGGSAVF
VARNRFAVLDKSHNQVMLKNLKNEVVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQ
QRLILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDS
GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGNALFCLDRDGTVKSFTIDATEYM
FKLSLLKKRFDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERIKILENVGHLPLAYITASTHGLHDVAERLAAEL
GNDIPSLPEGKTGSLLLPPTPVMCGGDWPLLRVMKGIFEGGLDNVGGGRADDDDDEVAEG
DWGEELDVVDVVDGLQNGDVTAILEDGEGAEENEEEGGWDLEDLELPPEADTPKVSVSSR
SSVFVAPTPGLPAYQAWIQRSSLAAEHVAAGNFDTAMRLLNRQLGIKNFAPLRSIFLDLH
AGSQTYLRAVSSAPIVSMAIERGFSESINTNAKGSPVLIFSFTQLEEKLKAGYKATTSGK
FAEALRLFLGILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQM
ELAAYFTHCNLQMPHLRLALLNAMTVCYKAKNLASAANFARRLLETNPSIENQAKTARQV
LQAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPSQEGQLCTVC
DLAVVGADASGLLCSPTQNR
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgctgacgaagtttgaaacgaagagtaatagagttaaagggttgagtttccacagtagg
aggccatggatccttgcgagtcttcacagcggagtgatccagttatgggattaccgtatg
ggcacgcttattgatagatttgatgagcatgaggggcctgttcgtggtgttcactttcac
aagtctcagcctctatttgtctccggaggggatgattataagattaaagtgtggaactat
aagactcatagatgtctatttactcttcttggacaccttgattatatacgtactgtgcaa
tttcaccatgagtatccatggattgtaagtgcgagtgatgatcagactattcgtatatgg
aactggcagtcacgtacttgtatctctgtgttgacgggccacaaccactatgttatgtgt
gcttcatttcatcccaaggaagatcttgttgtgtcagcttccctagatcagactgttcgt
gtttgggacattggtgccttgaggaagaagactgtctccccagcagatgatgtcttgcgg
ttgagtcaaatgaacgctgatctatttggcggtgtagatgctgttgttaaatatgtcttg
gaaggtcatgatcgaggtgttaattgggcagcattccatcctaccctgccgttgattgtg
tctggggctgatgatcgacaagtgaaattgtggcgaatgaacgacacaaaagcatgggaa
gtggacacactaagggggcacatgaacaatgtttcaagtgtgatgttccatgcaaaacaa
gatataattgtttccaattcagaggacaaaagcattcgcatttgggatgcaacaaagcga
actggacttcagacatttcgtcgagagcatgatagattttggattctcactgcacatcct
gagatgaatctattagcagctgggcatgacagtggcatgattgtctttaagctggagaga
gaaagacctgcatttgctactagtggcgattctctattttatgtgaaagaccgctttttg
cgcctctatgagttctccactcaaaaggattcacaggtcatcccagttcgaaggcctggt
tccactagcttgaatcagagcccaaggaccctttcatttagccctacagaaaacacagtt
cttatttgctcagatctggatgggggatgttatgaattttacaccataactaaggatagc
tttggtagaagcgatagctttcaagatgcaaagagaggacttggaggatcagcagtgttt
gtggctcgaaataggtttgctgtgctcgataaaagtcacaatcaagtcatgttaaaaaat
ctaaagaatgaggtagttaagaaggtccctattcccattactgcagatgcgatattttac
gctggaacaggtaatttattgtgtcgagcagaggatagagttgttatatatgatcttcag
cagagacttattcttggtgatcttcaaaccccatttgttaagtacgttgtttggtccaat
gacatggagagtgttgcattgcttagcaaacatgcaattattattgctaacaagaaactt
gttcaccagtgcactcttcatgagacaattcgtgtgaagagtggagcttgggatgatagt
ggtgtttttatttacacaaccctaaaccacattaagtattgcctccccaatggtgatagt
ggtataatcaaaaccctcgatgttccaatatatattacaaaggtttctggcaatgctctt
ttttgcttagatagggatggaacggttaagtcgtttactatcgatgctacagaatacatg
ttcaagctctctctcttgaaaaagagatttgaccatgtcatgagcatgataaggaactca
cagctctgtgggcaagcaatgattgcgtatttgcaacagaaagggtttcctgaggttgca
cttcactttgtgaaggacgagaggaccaggttcaatttggctcttgagagtggaaatatt
caaatagcagttgcctctgctacagcaattgatgagaaagatcattggtataggctgggt
gtcgaagctcttcgtcaaggcaatgccggcattgtggaatacgcctaccagaagactaaa
aattttgaaaggttatcgttcctttatctcataactggtaacacagccaaactgtccaag
atgttaaaaattgctgaagttaagaatgacgtcatgggtcaatttcacaatgctctatat
cttggtgatgttcgtgagcgtatcaagattttggagaatgttggccacttacctcttgca
tatattacagcgtcaacccatggtttacatgatgtagctgaaaggctggctgctgaattg
gggaatgacattccatctttaccagaaggcaaaaccggatccctcctcttgcctcctacc
ccagtcatgtgcggtggtgattggccacttctgagagtcatgaagggaatatttgaaggt
gggctggataatgtaggtgggggtcgtgctgacgacgacgacgatgaggttgccgagggt
gattggggtgaggagctggatgtcgttgatgtcgtcgatggcttacagaatggggatgtt
acagcaattttggaggatggggaaggtgcagaggaaaatgaggaagaagggggatgggac
cttgaagatttggagctcccacctgaagctgacactcccaaagtgtcggtcagttctcgg
agttcagtttttgtggccccaactcctggcctgcctgcctaccaggcttggatacagagg
tcatctcttgctgcagaacacgttgcagctggtaattttgatactgcaatgcggttactt
aacaggcaacttggaattaaaaactttgctcccttaagatccatatttctggatcttcat
gctggaagtcagacctatctccgtgctgtttcatctgcccccatagtgtccatggcgata
gaacgaggattcagcgaatctattaatacaaatgcaaaaggatcccctgtacttattttc
agtttcactcagttggaggagaagcttaaagctggttataaggccacaacatcaggaaag
tttgctgaggctcttcgtctttttctcggtattcttcataccatccctcttattgttgtt
gagtctaggagggaagtcgatgaggtgaaggagttaattattatcgttaaagagtacgtt
ttgggtttgcaaatggaactgaagaggagagaactcaaggacaatccagtacgtcaaatg
gagcttgcagcctattttactcactgcaaccttcagatgccacatttgaggcttgctcta
ttaaatgctatgactgtctgttacaaggccaagaaccttgccagtgctgccaacttcgct
cgtagacttctcgagaccaatccctcaattgagaatcaagctaagacagccagacaagtg
ctgcaggctgcagagaggaatatgacagatgcatcccaactgaattatgacttccgaaac
ccctttgtgacctgtggagcaacttacgtgccaatttatcggggtcagaaggatgtttct
tgcccatactgtagttccaggtttgtgccaagtcaggaagggcaactttgtactgtttgt
gatcttgctgttgttggtgcagatgcatctggtttactttgttctcccacccaaaatcga
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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