KEGG   Caulobacter mirabilis: CSW64_15990
Entry
CSW64_15990       CDS       T05166                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cmb  Caulobacter mirabilis
Pathway
cmb03030  DNA replication
cmb03410  Base excision repair
cmb03420  Nucleotide excision repair
cmb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CSW64_15990
   03410 Base excision repair
    CSW64_15990
   03420 Nucleotide excision repair
    CSW64_15990
   03430 Mismatch repair
    CSW64_15990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmb03032]
    CSW64_15990
   03400 DNA repair and recombination proteins [BR:cmb03400]
    CSW64_15990
Enzymes [BR:cmb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CSW64_15990
DNA replication proteins [BR:cmb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CSW64_15990
DNA repair and recombination proteins [BR:cmb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CSW64_15990
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CSW64_15990
   MMR (mismatch excision repair)
    DNA ligase
     CSW64_15990
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CSW64_15990
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT DZR_2 zf-ISL3 zf-NADH-PPase
Other DBs
NCBI-ProteinID: ATQ43788
UniProt: A0A2D2B0L2
Position
complement(3329859..3332270)
AA seq 803 aa
MSAEVPVSDLTEAQAVLELERLADEIAAHDIRYHQEDAPSISDADYDALKRRNLEIEALF
PQHVRENSPSLKVGAAASSQFAPAPHGVPMLSLDNAFADEDVTDFDARVRRFLRLSAEDH
VAFTAEPKIDGLSASLRYEKGRFVRGATRGDGRTGEDITANLRTLNDIPEQLSGSGWPDV
IEVRGEVYAPVEEFEAFNKASEEAGGRTYANPRNFAAGSLRQIDPTVTAKRPLRFFAYAW
GEVSAPFAETQWEALGRFKDWGFTTNDRSRRVEDAQGLLDVYRGIGAERSTLPYDIDGVV
YKVDRLDWQSRLGFVSRSPRWAIAHKFPAQQATTTLEAIDIQVGRTGALTPVARLHPVTV
GGVVVRNATLHNEDEIIRKDVRVGDTVVLQRAGDVIPQVVAVVEAQRPPEAVPYVFPHVC
PVCGSKAVRDAGQAVRRCTGGLICSAQLTERIKHFVSRRAFDIEGFGDIYVDLLFDKGVL
KSPADIFRLRQRAEAVKAAILERRKEQAEARRLQKAQDDDARVGKAISDENRAFDGLEKL
FDSIDARRRISLDRFLFALGIRDIGETTAVNLARAFDSFEELRQALLRASEQGPAEAYAE
LSDMRGMGPKARDQLLLIAPTLEADPWPDAPMAQKLDHALAGLASPARRALAARFDDWSA
FVAWAKEAAAGAPGDDFVSLSAIDGIGPVAAQSIAAFFGEAHNRDLVEALVGELAAIEPL
AKAKTDTAVAGKTVVFTGALEKMTRDEAKAQAEGLGAKVAGSVSKKTDLVVAGPGAGSKL
KDAEKHGVKVLTEDEWLEMIGVG
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgagcgctgaagtccccgtctccgatctcaccgaagcccaggccgtcctcgagctggag
cggctcgccgacgagatcgcggcgcacgacatccgctaccaccaggaagacgccccctcg
atcagcgacgcggactacgacgcgttgaagcggcggaacctggagatcgaggcgctgttc
ccgcagcacgtccgggagaacagtccttcgctgaaggtcggcgccgccgcctccagccag
ttcgcgccggcgccgcacggcgtgccgatgctgagcctggacaacgccttcgccgacgag
gacgtcaccgacttcgacgcccgcgtcaggcgttttctgcgactgtcggcggaggaccat
gtcgccttcacggccgagccgaagatcgacggcctgtccgcctcgctgcgctacgagaag
ggccggttcgtgcggggggccacgcggggcgacggccgcaccggcgaggacatcaccgcc
aacctgcgcaccctgaacgacatccccgagcagctgtccggctccggctggccggacgtc
atcgaggtccgcggcgaggtctacgccccggtcgaggaattcgaggccttcaacaaggcg
tcggaggaggcgggcggccgcacctacgccaatccgcgcaacttcgccgccggctcgctg
cgccagatcgacccgaccgtcaccgccaagcggccgctgcgcttcttcgcctacgcctgg
ggcgaggtcagcgcgcccttcgccgagacccagtgggaggcgctgggcaggttcaaggac
tggggcttcaccaccaacgatcggtcgcggcgggtcgaggacgctcagggcctgctcgat
gtctaccgcggcatcggggccgagcggtcgacgctgccctatgacatcgacggcgtcgtc
tacaaggtcgaccggctggactggcagtcgcggctgggcttcgtctcccgctcgccgcgc
tgggccatcgcgcacaagttcccggcccagcaggcgacgacgacgcttgaggccatcgac
atccaggtcggccgcaccggggccctgaccccggtggcgcggctgcatccggtcacggtc
ggcggcgtcgtcgtgcggaacgccaccctgcacaatgaagacgagatcatccgcaaggac
gtccgcgtcggcgacacggtcgtgctgcagcgcgccggcgacgtcatcccgcaggtcgtg
gccgtggtcgaggcgcagcgcccgccggaggccgttccctacgtcttcccgcacgtctgc
ccggtctgcggcagcaaggcggtccgggacgccggccaggccgtccgccgctgcaccggc
ggcctgatctgctcggcccagctgaccgaacgcatcaagcacttcgtctcacgccgcgcc
ttcgacatcgagggcttcggcgacatctacgtcgacctgctgttcgacaagggcgtgctg
aagagcccggccgacatctttcgtcttcgccagcgtgcggaggccgtgaaggcggccatc
ctggagcgtcgcaaggagcaggccgaggcccgccggcttcagaaggcccaggacgacgac
gcccgcgtcggcaaggcgatcagcgacgagaaccgcgctttcgacgggctggagaaactg
ttcgacagcatcgacgcccggcgcaggatctcgctggaccgcttcctgttcgcgctgggc
atccgcgatatcggcgagaccaccgcggtcaatcttgcgcgggccttcgacagtttcgag
gaactgaggcaggcgctgctgcgggcttcggagcaggggccggccgaggcctacgccgag
ctgtcggacatgcgcgggatgggccccaaggcgcgggatcaactgctgctgatcgcgccg
acgttggaggcggacccttggcccgacgcgccgatggcccagaagctggaccatgccctg
gccggtctggccagtcccgcccggcgggcgctggcggcgcggttcgacgactggtcggcc
ttcgtcgcctgggcgaaggaggcggccgcgggcgcgccgggggacgacttcgtctccctg
tcggccatcgacggcatcggtccggtggcggcccagtcgatcgccgccttcttcggggag
gcgcacaaccgggacctggtcgaggccctggtcggcgaactggccgcgatcgagcccctg
gccaaggccaagaccgacacggcggtggccggcaagaccgtggtcttcaccggcgcgctg
gagaagatgactcgcgacgaagccaaggcccaggccgaggggctcggcgcaaaggtggcc
ggttcggtgtcgaagaagaccgacctggtggtcgcaggcccgggggcgggctccaagctg
aaggacgccgaaaagcacggcgtgaaagttctgaccgaggacgaatggctggagatgatc
ggggtcgggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system