KEGG   Clavibacter nebraskensis: CMN_00502
Entry
CMN_00502         CDS       T02530                                 
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
cmc  Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:cmc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmc03400]
    CMN_00502 (phrB)
Enzymes [BR:cmc01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     CMN_00502 (phrB)
DNA repair and recombination proteins [BR:cmc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    CMN_00502 (phrB)
 Prokaryotic type
    CMN_00502 (phrB)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: CCE74466
UniProt: M5BCR3
Position
complement(494920..496446)
AA seq 508 aa
MSDDDAPDRGSDDREGGDGAQGPSIVWLRDDLRVADNPALHAAVERGEPIVVLYVLDEES
DGIRPLGGAARWWLHMSLARLGESLRELGSPLVLRRGKAADVVDGLVREVGAGAVLWNRR
YGGAEIAVDTAIKKGLGDRGLDVRSFQGSLLVEPWTVTNKQGEPFRVYTPFWKTAQEREE
PRKPLPAPHELDAPRTAPRSDDLDGWGLLPTKPDWAAGLREACDPGEAAGLQRLEDFVHH
ELEDYSTQRDEPAAMTTSRLSAYLRWGEVSPFQVWHRIQRTRGKKVGGDGVNATKFLSEL
GWREFSYHLLYHQPDLATRNFVPRFDAFPWDEPTDETLGAWQRGETGVPLVDAGMRALWK
DGHLHNRVRMVVASFLIKNLLIDWRHGEQWFWDTLVDADAANNAASWQWVAGSGADAAPY
FRVFNPVLQGRKFDPAGEYIRSYVPELAHAPRDVVHEPWKVMGDLVASAEDGADDQAAGG
LAAYPAPIVDLKESRQRALAAYDEIKDR
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgagcgacgacgacgccccggaccgcggatccgacgatcgggagggcggcgacggggcg
cagggcccgagcatcgtgtggctccgcgacgacctccgcgtggccgacaacccggcgctg
cacgcggccgtcgagcggggcgagcccatcgtggtgctgtacgtgctcgacgaggagagc
gacgggatccggccgctcggcggcgccgcgcgctggtggctgcacatgagcctcgcgcgc
ctcggggagtcgctccgggagctcggctccccgctggtgctacgccgcgggaaggccgcc
gacgtcgtcgacggcctcgtgcgagaggtcggcgcgggcgcggtgctgtggaaccgtcgc
tacggcggcgcggagatcgcggtcgacaccgccatcaagaagggcctcggcgaccggggc
ctcgacgtgcgcagcttccaggggtcgctgctcgtcgagccgtggacggtgacgaacaag
cagggcgagccgttccgggtctacacgccgttctggaagaccgcccaggagcgcgaggag
ccgcggaagccgctccccgcgccgcacgagctcgacgcgccgcggacggctccccgctcg
gacgacctcgacggctgggggctgctgccgaccaagcccgactgggcggccggcctccgc
gaggcctgcgaccccggcgaggccgccggactgcagcgcctcgaggacttcgtgcaccac
gagctcgaggactactccacccagcgcgacgagcccgcggcgatgacgacctcgcggctg
tcggcgtacctgcgctggggcgaggtgagcccgttccaggtgtggcaccggatccagcgc
acgcgcggcaagaaggtcgggggcgacggggtcaacgccaccaagttcctctcggagctc
ggctggcgggagttcagctaccacctgctgtaccaccagccggatctcgcgacccggaac
ttcgtgccgcgcttcgacgcgttcccctgggacgagccgaccgacgagacgctcggcgcg
tggcagcgcggagagacgggtgtgccgctcgtcgacgccggcatgcgcgcgctctggaag
gacgggcacctgcacaaccgggtgcggatggtcgtggcgtcgttcctcatcaagaacctg
ctgatcgactggcgccacggcgagcagtggttctgggacacgctcgtcgacgcggacgcg
gccaacaacgcggccagctggcagtgggtcgcgggatccggcgcggacgccgccccgtac
ttccgggtgttcaaccccgtgctgcaggggcggaagttcgacccggcgggcgagtacatc
cgctcgtacgtgcccgagctggcgcacgcgccgcgggacgtggtgcacgagccgtggaag
gtgatgggcgacctggtcgcgagcgccgaggacggcgcggacgaccaggccgcgggcggg
ctcgcggcctacccggcgccgatcgtcgacctcaaggagtcccggcagcgggcactcgcg
gcgtacgacgagatcaaggaccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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