KEGG T02530: CMN

Clavibacter nebraskensis: CMN_00859

Entry

CMN_00859         CDS       T02530

Name

(GenBank) cell surface protein

K20276

large repetitive protein

Organism

cmc Clavibacter nebraskensis

Pathway

cmc02024

Quorum sensing

Brite

KEGG Orthology (KO) [BR:cmc00001]
09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMN_00859

SSDB

Motif

Pfam:

SpaA

Other DBs

NCBI-ProteinID:

CCE74815

UniProt:

M5B7C4

Position

868247..872560

AA seq 1437 aa
MALHMPSRRSRLATATAFGLAAAIVAFGGTAPANAAPGDTAEAEGRFLTLTNVPQVIALD
GAYASYGPGDTAAQVEDAPLDATVLGGLANAQLAAGVTLGSLLDLDQAAAAGVLQQYAAA
GPAGATGAAGAVSDSGAITVGQGGGQQTVIGLGSTIASIGADDALSDLSLRFGAISSTVT
STGTGTPTSDYDIASAEAVLTSPLVAQISSRLTTAVDGIAPGIAADIDVSAATGPLLEEI
LGENVLTSALRVGTPTVTTTANVDTAAVVQAALAEPLTNEDGTVSIDVSAGTITVDLDRI
QALNDRAAGTSVLTSALLSSVVDSAITDVFTDVLPNRLVDALRASTTVNVAVTAPLTTGL
LNANAGPLGVDVNLSLDRLLGGTTGTAPTVSLTRTALLPPLNATVDLALLTPLFDDLVTA
LIGANADTNLLPAVGTALTGVSTGVITALAPAFPVVDRVVRLTVNEQTPDAFVDGDGVDA
GSSSVTALRVRLLGNGGPTIDLARSTVRAVPAPAADDVTIASPTPAQVIELPAGETTVVV
PVTGTADPDAEVTLTVGGQTVGPQPVGPGNAYTLTPPALPAGTYTATVTQTIDGQAAGSE
TVTFTIAAAAADITITTPTADQVFLTTAADPTVDVPVEGAADARASVTVTIPGQTAQTEL
VGADGVYDVTFADLPVGTYTATATQSIDGVVRGTETVTFTVGAPAAGVTITAPENGDLIL
SAGAVPTADVPVTGAADPRASVTVTIPGQDPQTEHVGDDGIYDVLFADLPVGDYTATATQ
SIGGVASGTATVTFSVVAPAVAVVIDTPTDGQDITVPAGGTAVDVTVTGSADPRGSVLIA
VTGQTPVTQVVGDDGRFEATFPGLTAAGYTVTVTQTVFDAPAGSDTADFTVSIAGVDQVV
IETPGDGDFLPLPDGDTTVSVPVTGTADPDAAVTLTVGGTTTAPVDVDDDGDFTLATPAL
PAGTYTGTVTQTIGGVAVGTDTVTFTVGVPVDIGSPFDFQVFPLDGGATTRDVPISGTAD
PLGTVTVSILGLDPITTEVDAEGNYSVTFFGLERGSYEAIATQTIGGAPAGDATVEFDVG
VTGEEGIDSDAVAAVDVDGDGTDVTDGGVDADAVDADGAADAAGADASDAAGADATDAAG
ADATDATDAAGADATDAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGA
DATDAAGTDATDAAGADATDPAGTDATDAAGTDVTDAAGTDATDAAGTDAADATDAAGTD
AADATDAADATDGSTDGGDAPTRAVVRFTELVRGSGSVQVVDAFGFIPGETLNATVFSTP
RPLTPMVADADGRATFMFEIGPDFELGDHRVEVVGVDSGMADEMITRFRVVGSTVPAGQP
GTPISGGYGGGILPVTGGDGDGMLLLGGIALLMMLTGAGAGAGAGAGALHRGRSRRA

NT seq 4314 nt +upstreamnt +downstreamnt
atggcactacacatgcccagccgcagaagcaggctggcgaccgcgacggccttcgggctc
gccgcggcgatcgtcgcgttcgggggcaccgcgcccgcgaacgccgcaccgggggacacg
gcggaggccgagggacgcttcctgaccctgacgaacgtcccgcaggtgatcgccctcgac
ggcgcatacgcctcgtacggcccgggtgacaccgccgcgcaggtggaggacgcgccgctg
gacgcgaccgtcctcggggggctcgcgaacgcgcagctcgccgccggtgtcacgctcggc
tcgctcctcgacctggaccaggcggcagcggccggcgtgctgcagcagtacgcggccgcg
ggaccggccggcgccacgggcgcggcgggagccgtgtcggacagcggcgccatcacggtc
ggccagggcggcgggcagcagacggtcatcggcctcggctcgaccatcgcctcgatcggc
gcggacgacgccctctccgacctctcgctgcgcttcggcgcgatctcctccaccgtcacg
tcgacgggcacggggacgccgacctcggactacgacatcgcctcggccgaggccgtgctc
acgagcccgctggtcgcccagatcagctcgcggctcacgacggccgtcgacggcatcgcc
cccggcatcgccgctgacatcgacgtctcggccgccacgggcccgctcctcgaggagatc
ctcggggagaacgtgctgacctcggccctccgggtcgggaccccgaccgtcacgaccacg
gcgaacgtggacacggccgccgtcgtgcaggccgcgctcgccgagcccctcacgaacgag
gacggcacggtctcgatcgacgtgtccgccggcaccatcacggtggacctcgaccggatc
caggcgctgaacgaccgcgccgccggcacctcggtcctgacctcggcgctcctctcgagc
gtcgtcgactcggcgatcacggacgtcttcacggacgtgctgccgaaccgcctcgtggac
gcgctccgcgcctccaccacggtgaacgtcgcggtcaccgcgccgctcacgacgggcctg
ctcaacgcgaacgccggcccgctcggcgtggacgtcaacctgtcgctcgaccgcctgctc
ggcggcacgaccggcacggcgcccactgtcagcctcacccgcaccgcgctgctgccgccg
ctgaacgcgacggtggacctcgcgctgctcacgccgctgttcgacgacctcgtcaccgcg
ttgatcggcgcgaacgcggacaccaacctgctgccggccgtcggcaccgccctcaccggc
gtcagcacgggcgtgatcaccgccctcgccccggccttcccggtcgtcgaccgggtggtg
cgcctcacggtcaacgagcagacgccggacgcgttcgtcgacggggacggcgtcgacgcc
ggttcctcctcggtgaccgccctccgcgtgcggctgctcgggaacggcgggccgaccatc
gacctggcccgctcgaccgtccgcgccgtcccggcccccgcggccgacgacgtgaccatc
gcgtcgccgacgcccgcccaggtgatcgagctgccggccggggagacgaccgtcgtcgtg
cccgtcaccggcaccgccgaccccgacgccgaggtcacgctgaccgtcggcggccagacg
gtcggaccgcagccggtcggacccgggaacgcctacacgctcacccctcccgccctcccg
gcgggcacctacaccgcgaccgtcacccagacgatcgacgggcaggccgcgggctccgag
acggtgaccttcaccatcgccgcggccgccgcggacatcacgatcacgacgcccaccgcg
gaccaggtcttcctgaccaccgcggcggacccgacggtcgacgtgcccgtggagggcgcg
gcggacgcgcgcgcctccgtcaccgtgacgatccccggccagaccgcgcagaccgagctg
gtcggcgcggacggcgtctacgacgtgacgttcgccgacctgccggtcggcacctacacg
gcgaccgccacccagtcgatcgacggcgtggtccgcgggacggagacggtgaccttcacg
gtcggcgcccccgccgccggggtcaccatcaccgcgccggagaacggcgacctgatcctc
agcgccggcgccgtgccgacggccgacgtccccgtgaccggcgccgccgacccgcgcgcc
agcgtcacggtgacgatcccgggccaggacccgcagaccgagcacgtcggtgacgacggg
atctacgacgtgctgttcgccgacctcccggtcggcgactacacggcgaccgcgacccag
tccatcggcggcgtcgcctccgggacggcgaccgtgaccttctcggtcgtcgcacccgcc
gtcgccgtggtcatcgacaccccgaccgacgggcaggacatcacggtcccggccggcggc
accgcggtggacgtgaccgtcaccggcagcgcggacccgcgcggctccgtgctcatcgcg
gtgacgggccagacccccgtcacgcaggtggtcggggacgacggccgcttcgaggcgacg
ttcccgggcctcacggccgccgggtacaccgtcacggtgacgcagaccgtcttcgacgcc
cccgcgggctcggacacggccgacttcaccgtctccatcgccggcgtcgaccaggtcgtc
atcgagacccccggtgacggcgacttcctcccgctgccggacggggacaccaccgtctcc
gtcccggtgacgggcacggccgacccggacgccgccgtgaccctcacggtcggcggcacg
acgacggctcccgtcgacgtggacgacgatggcgacttcacgttggcgacgcccgccctg
cccgcgggcacctacacgggcaccgtcacccagacgatcggcggcgtcgccgtcggcacc
gacaccgtgaccttcacggtcggcgtgccggtggacatcggctcgccgttcgacttccag
gtcttcccgctcgacggcggggcgacgacccgggacgtgcccatctccggcacggccgac
ccgctggggacggtgacggtctcgatcctcgggctcgacccgatcaccacggaggtcgac
gcagagggcaactactcggtgacgttcttcggcctggagcgcggatcctacgaggcgatc
gcgacgcagaccatcggcggcgctcccgccggtgacgcgacggtcgagttcgacgtcggc
gtgaccggcgaggagggcatcgactccgacgccgtggccgcggtggacgtggacggcgac
ggcacggacgtcaccgacggcggcgtggacgcggacgcggtcgacgccgacggcgccgcg
gatgccgctggtgcggacgcgtccgacgccgctggcgcagacgcgaccgacgccgctggt
gcggatgcgacggacgcgaccgatgctgctggcgctgacgcgacggatgctgctggtacg
gacgcgacggatgctgccggtacggacgcgacggatgctgccggtacggacgcgacggac
gctgctggcacggacgcgaccgacgctgctggcacggacgcgacggacgctgctggcgcc
gatgcgacggatgctgctggcacggatgcgacggatgccgctggcgctgacgcgacggac
cctgctggtacggacgcgacggatgctgctggcaccgacgtgacggatgccgctggcact
gacgcgacggacgccgccggtaccgacgcggctgacgcgacggacgccgccggcacggac
gcggccgacgccacggacgccgccgacgcgaccgacggatccaccgacgggggcgacgcc
cccacccgggccgtcgtccgcttcacggagctcgtccgcgggagcgggtcggtgcaggtg
gtcgacgccttcgggttcatccccggtgagacgctcaacgcgacggtgttctccacgccg
aggccgctgacgccgatggtcgcggatgccgatggacgcgcgaccttcatgttcgagatc
ggcccggacttcgagctcggggaccaccgggtcgaggtggtcggtgtcgactcgggcatg
gccgacgagatgatcacgcggttccgggtcgtcggatccaccgtcccggctggccagccc
ggcacgccgatcagcggcggctacggcggcgggatcctcccggtcacaggcggcgacggc
gacgggatgctgctgctcggcggcatcgcgctcctgatgatgctgaccggtgccggtgcc
ggtgccggtgccggtgccggtgccctgcaccgcggccgcagccgacgggcgtga

All links

Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   RefGene (95)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (103)   

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