KEGG   Clavibacter nebraskensis: CMN_02936
Entry
CMN_02936         CDS       T02530                                 
Symbol
pcnA
Name
(GenBank) RNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
cmc  Clavibacter nebraskensis
Pathway
cmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CMN_02936 (pcnA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmc03019]
    CMN_02936 (pcnA)
Enzymes [BR:cmc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     CMN_02936 (pcnA)
Messenger RNA biogenesis [BR:cmc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CMN_02936 (pcnA)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 DUF3987
Other DBs
NCBI-ProteinID: CCE76860
UniProt: M5BBX5
Position
complement(3047984..3049414)
AA seq 476 aa
MHSVAQALERLRELAASPPVAVLARAFHEAGHELALVGGPVRDSFLGRAATDLDLTTDAR
PDRILEIVKPVADAHWDIGRAFGTIGARVKGEQVEITTYRTDQYDGVSRKPEVEFGSSLE
EDLVRRDFTVNALAVRLPQVVLVDPSGGIDDLLAQLLRTPVAPEVSFGDDPLRMMRAVRF
ASQLGFRLDDGALAAIRDMAPRILDISVERVSDELSKLLRTPEPRAGLDLLVEGGLAEHV
LPELPAMKLEADEHHRHKDVYQHSLQVLDQAIDHERSRHPGKAPDLVLRLAALLHDIGKP
STRRLEPGGVVTFHHHDVVGSKMAKRRLRALRFDNDTIASVARLIELHLRFFGYTEGGWT
DSAVRRYVRDAGPELERLHMLTRADVTTQNRRKADRLGFAYDDLETRIAELAEQEEMAAV
RPDLDGEAIMRILDVPPGPVVGRAYRFLLELRLDEGPLPEDEAERRLVAWWAAEQA
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgcacagcgtcgcacaggccctcgagcgtctccgcgagctggccgcatcgcccccggtc
gccgtgctcgcccgcgccttccacgaggcgggccacgagctcgccctcgtcggcggaccg
gtccgcgactccttccttggccgagccgcgaccgacctcgacctcaccacagacgcccgc
ccggatcgcatcctcgagatcgtgaagcccgtcgccgacgcccactgggacatcggccgc
gcgttcggcaccatcggcgcgcgcgtgaagggggagcaggtcgagatcacgacctaccgc
accgaccagtacgacggcgtctcccgcaagcccgaggtcgagttcggctcctcgctcgag
gaggacctcgtgcgccgcgacttcacggtcaacgcgcttgccgtgcgcctgccccaggtg
gtcctggtggatccgtccggcggcatcgacgacctcctcgcccagctgctccgcacgccc
gtcgccccggaggtctcgttcggcgacgacccgctccgcatgatgcgcgccgtccgcttc
gcctcgcagctcggcttccgcctcgacgacggtgcgctcgccgccatccgcgacatggca
ccgcggatcctcgacatctccgtcgagcgcgtgagcgacgagctctccaagctgctgcgc
acgcccgagccgcgcgcgggcctcgacctgctcgtggagggcggcctcgccgagcacgtg
ctgcccgagctccccgcgatgaagctcgaggccgacgagcaccaccgccacaaggacgtc
taccagcactccctccaggtgctcgaccaggcgatcgaccacgagcgctcccgccacccc
ggcaaggcgccggacctcgtgctccggctggccgcgctcctccacgacatcggcaagccg
tccacgcgtcgcctcgagcccggcggggtcgtgaccttccatcaccatgacgtcgtcgga
tccaagatggccaagcgccgactccgcgccctccgcttcgacaacgacaccatcgcgtcc
gtcgcgcgcctcatcgagctgcacctccgcttcttcggctacaccgagggcggctggacc
gactcggccgtccgccgctacgtgcgcgacgccggccccgagctcgagcgcctgcacatg
ctcacgcgcgccgacgtcaccacgcagaaccgccgcaaggccgaccgcctcggattcgcc
tacgacgacctcgagacccggatcgccgagctcgccgagcaggaggagatggcggccgtg
cgccccgacctcgacggcgaggcgatcatgcgcatcctcgacgtgccgccgggcccggtc
gtgggccgcgcctaccgattcctcctcgagctgcgactcgacgaaggccccctcccggag
gacgaggccgagcgtcgcctcgtcgcgtggtgggccgccgagcaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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