KEGG   Corynebacterium maris: B841_01620
Entry
B841_01620        CDS       T02784                                 
Name
(GenBank) DNA topoisomerase I subunit omega
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cmd  Corynebacterium maris
Brite
KEGG Orthology (KO) [BR:cmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmd03032]
    B841_01620
   03400 DNA repair and recombination proteins [BR:cmd03400]
    B841_01620
Enzymes [BR:cmd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     B841_01620
DNA replication proteins [BR:cmd03032]
 Prokaryotic type
  DNA Topoisomerases
   B841_01620
DNA repair and recombination proteins [BR:cmd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B841_01620
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: AGS33807
UniProt: S5SRZ9
Position
334709..337627
AA seq 972 aa
MIVESATKAKKIQEYLGSDYIVEASVGHIRDLPRGAADVPAKYKKEPWARLGVNTEDGFQ
ALYVVSPDKKKKVSDLKAKLKQSDRLFLATDPDREGEAIAWHLLEVLKPTVPVRRMVFNE
ITAAAIREAAETTREIDYHLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVAT
RVIVERERERMAFISAEYWDLAATLDTGEEQSDAENPRTFQAKLTGVDGKRVAQGRDFND
RGQLKGSTDEIAVVDKQTAEALAAGLDAATMTVTSVEQKPYSRKPQAPFMTSTLQQESGR
RLHYTSERTMRIAQRLYENGHITYMRTDSTSLSAQGLKAARQQATELYGENFVADQPRRY
DRKVKNSQEAHEAVRPAGDRFATPGELHGVLDAEEFKLYELIWARTVASQMADARGTSLK
VVIEGETTSGERTEFSATGRTITFPGFLRALSEKTDKSDVRLPQLTEGDSVDVEQVTADG
HATNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVYPRGNALVPSWVAFAVVG
LLEDNFSALVDYDFTSSMEDELDEIAEGSSDRTEWLTGFYYGDEQASDAMAESIAKQGGL
KDMIEGNLESIDARKVNSLVLFQDDQGRDVVVRVGRYGPYIERVVGVTAEGEPDYQRANL
PEATTPDELDLELAEKLFATPQGGRELGVNPANGRMVVAKEGRYGPYVTEIVRDDEQATA
EQEALEIVAQERAEEDAQRKADGMRKKNWETKTAEKQKHKRIDQHIEEKLKPKTASLFAS
MSPAEVTLEEALQLLSLPREVGEDDGEMITAQNGRYGPYLKKGSDSRSLSDEEQIFTITL
DQARRIYAEPKRRGRAAAKPPLKELGDNDVSGKPMSVKDGRFGPYVTDGETNASLRRGDT
PETMTDSRANELLSERRAKVAADGGTKASKKSAKKTTKKTTKKTTKKTTKKTTRKKPPQT
TKNVVKAGSRRK
NT seq 2919 nt   +upstreamnt  +downstreamnt
gtgatcgtggagtcggccaccaaggccaaaaagatccaggagtatcttggttccgactac
atcgtggaagcctccgtcggccacatccgggacctgccgcgcggcgccgcggacgtgccg
gccaagtacaagaaggagccctgggcgcgtctcggcgtcaacaccgaggacggcttccag
gccctgtacgtggtcagcccggacaagaagaagaaggtctccgacctcaaagcgaagctg
aagcagtccgaccgacttttcctggcgacagacccggaccgggagggcgaggccatcgcc
tggcacctgctcgaggtactcaagccgacggtgccggtacgccgcatggtgttcaacgag
atcaccgccgccgccatccgggaagccgcggaaaccacccgcgagatcgactaccacctc
gtcgacgcgcaggaaacccgccgcatcctggatcgcctctacggctatgaagtgtccccg
gtgctgtggaagaaggtcatgccccggctgtcggcggggcgtgtgcagtcggtggccacc
cgcgtcatcgtggagcgcgaacgcgagcgcatggcgttcatttccgcggagtactgggat
ctggcggcgacgctggacaccggcgaagagcagtcggacgcggagaacccgcgcaccttt
caggccaagctcaccggcgtcgacggcaagcgcgtggcccagggccgcgacttcaacgac
cgcggccagctgaagggttccacagacgagatcgcggtcgtcgacaagcagacggccgag
gcgctggccgccgggctggacgccgcgacgatgacggtgacctccgtcgagcagaagccg
tactcgcgcaagccgcaggcgccgttcatgacctcgacgctgcagcaggagtcgggccgc
cgcctgcactacacctccgagcgcacgatgcgcatcgcgcagcgcctgtacgaaaacggc
cacatcacctacatgcgcaccgactcgacctcgctgtcggcgcaggggctgaaggccgcc
cgccagcaggccaccgaactctacggggagaacttcgtcgcggatcagccgcgccgctac
gaccgcaaggtcaagaactcacaggaggcgcacgaggcggtgcgccccgccggcgaccgc
ttcgccacccccggtgagctgcacggcgtgctcgacgccgaggaattcaaactctacgaa
ctgatctgggcgcgcaccgtcgcctcccagatggccgacgcccgcggcacctccctcaag
gtcgtcatcgagggcgagaccacctccggcgagcgcaccgaattctctgccaccggacgc
accatcaccttccccggctttctgcgtgccttgagcgaaaagaccgacaagtcggacgtg
cgcctgccgcagctgaccgaaggtgactccgtggatgtggagcaggtcaccgccgacggc
cacgccaccaacccgccggcccgctacacggaagcctccctggtcaagaagatggaggac
ctgggcatcggacgcccgtcgacgtacgcgtcgatcatcaagaccatccaggaccgcggc
tacgtctacccgcgcggcaacgcgctggtgcccagctgggtggcctttgccgtcgtcggc
ctgctggaggacaacttctccgcgctcgtcgactacgacttcacctcctcgatggaggac
gagctcgacgagatcgccgagggcagctccgaccgcaccgagtggctgaccggcttctac
tacggtgacgagcaggcctccgacgcgatggcggaatccatcgccaagcagggcgggctg
aaggacatgatcgagggcaacctcgaatccatcgacgcccgcaaggtcaactcgctcgtg
ctcttccaggacgaccagggccgcgacgtcgtcgtgcgcgtcggccgctacggcccctac
atcgagcgcgtcgtcggcgtcaccgccgaaggcgagcccgactaccagcgcgcgaacctc
ccggaggcgaccaccccggacgagctcgacctggagttggcggaaaagctcttcgccacc
ccgcagggcggccgcgaactgggggtaaacccggccaacgggcgcatggtcgtggccaag
gaaggccgctacggcccgtacgtcaccgagatcgtgcgtgacgacgagcaggccaccgcc
gagcaggaggccctggagatcgtcgcccaggagcgcgccgaggaggacgcgcagcgcaag
gccgacggcatgcgcaagaagaactgggagaccaagaccgccgagaagcagaagcacaag
cgcatcgaccagcacatcgaggagaagctcaagccgaagacggcgtcgctgtttgcctcc
atgagcccggccgaggtcacgctggaggaggcgctgcagctgctgtcgctgccgcgcgaa
gtcggcgaggacgacggcgagatgatcaccgcgcaaaacggccgctacggcccgtacctg
aagaagggctccgactcgcgctcgctgtcggacgaggagcagatcttcacgatcaccctg
gatcaggcccgccgcatctacgcggagcccaagcgccgcggccgtgccgccgcgaagccg
ccgctgaaggagctcggcgacaacgacgtctccggcaagccgatgagcgtgaaagacggc
cgcttcgggccgtacgtcaccgacggagagaccaacgcctctctgcgccgcggcgacacc
ccggagaccatgaccgactcccgcgccaacgagctgctctccgagcgccgggccaaggtc
gcggccgacggcggcactaaggcctcgaagaagtcggcgaagaagaccaccaaaaagacg
accaagaaaaccacgaagaagacgacgaagaagacgacccgcaagaagccgccgcagacc
acgaagaacgtggtcaaggccggcagcaggaggaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system