KEGG   Cyanidioschyzon merolae: CYME_CMH273C
Entry
CYME_CMH273C      CDS       T00175                                 
Name
(RefSeq) similar to nuclear import protein NPL4
  KO
K14015  nuclear protein localization protein 4
Organism
cme  Cyanidioschyzon merolae
Pathway
cme04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CYME_CMH273C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cme03009]
    CYME_CMH273C
Ribosome biogenesis [BR:cme03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    CYME_CMH273C
SSDB
Motif
Pfam: NPL4 UN_NPL4 JAB Ubiquitin_4 ubiquitin LpqV YukD
Other DBs
NCBI-GeneID: 16993593
NCBI-ProteinID: XP_005536200
UniProt: M1V7M8
Position
8:706531..707988
AA seq 485 aa
MLVRVRKEDGTVVRFTVEPQTTVGELKREILRLGHSNRVDLELLKDPSLTDSRLQDETAS
LEACGVTHGDLLVIERDLQKPPNGESVSAPPSGARSPAPNATAQGGCQNSTEPTATPQYL
VSYAPSGLFTESEYERACEAYSRLMDERRKRKQHEFMERRGLGGLKGMTVDYLEWLDAQH
FRLRSQDESPCSQCSIDRQAADAFQSYLLRIHDSQMRYGILYGDVVASEGLVKVEAIFEP
PQAGDADRYLPLPESEVAIREADTLAHYLGMRRVGWIFTHRAEDRSHALHARDVAYAAKL
QLETTAYHLAEQERDQTPEASFDWSRYFVTIAVSIQPDGRRHFEAYQLSDQCLLMAQAGI
LMPVSDSGELHTLDEVVVEGNRVRRVDTDFFLVLVPIRDHQGWLRTAFPIENREVEPQSI
TDVQRVLESGYGKFTERIADFHLLLFLSRILGMESDMPLLANAIVERRDLEPAELGYQLL
IESLR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgttggtgcgcgttcggaaggaagacggcacggttgtacggttcactgtggagccgcag
accactgtcggtgagctgaagcgggagatcttgaggctcggccatagtaaccgcgttgat
ctcgagcttcttaaggatccttcactcacagattcgcgcctgcaagatgaaactgcttcc
ctggaagcctgcggtgtaacccatggggacctgctggtcatcgaacgcgacctgcagaag
cctcccaacggcgagtcggtgtcagcgcctccgtctggggcccggtcacccgcaccaaac
gcgacagcccaaggcggctgccagaactccaccgaacctaccgctacaccgcagtacctt
gtgtcctatgcgccaagcgggctcttcactgagagcgaatacgaacgagcgtgcgaggcg
tactcgcgtctgatggacgaacgacgaaagcggaaacagcacgagtttatggagcggcga
ggtcttggcggcctcaaaggaatgacagtggactacctggaatggcttgacgcccagcac
tttagactgcgctctcaggatgaatcaccgtgtagtcagtgctcgatcgatcgccaggct
gctgacgccttccagtcgtatcttttgcgcatccacgactcgcagatgcgttatgggatt
ctctatggtgacgttgtcgccagtgagggtctggtgaaagtagaggcgatttttgagcca
ccgcaagccggagacgccgaccggtatcttccgctacccgagagcgaggtcgccattcga
gaagccgacacactcgcccattatcttggcatgcggcgagttggttggatttttacgcac
cgagccgaggaccgctcgcatgcgctgcatgctcgtgatgttgcctatgcggctaaactg
caactggagactacggcataccacctggccgagcaggagcgagatcaaacacccgaggcg
tcttttgattggtcgcggtactttgtcacgattgctgtttctatccagcctgacggtcga
cgacattttgaggcataccagctgtctgatcagtgtctgttgatggcacaagcgggaatt
ttgatgccggtgagcgatagcggtgagcttcacacgctcgatgaagttgttgtcgaaggc
aatcgcgttcgccgagtcgacacggactttttcctcgtgttggtacccattcgcgaccat
caaggatggctccgcactgcgtttcctattgagaatcgcgaagtggagccccagagcatc
actgatgtacagcgtgtgctagaaagcggctatggaaaatttacagagcgaattgcagac
tttcatttgcttctctttctttctcggatccttggtatggagagcgatatgccgctcctc
gcgaatgctatcgtcgagcgacgtgacttggaaccggctgagttgggataccagctactc
attgagagtctccgttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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