KEGG   Cyanidioschyzon merolae: CYME_CMO165C
Entry
CYME_CMO165C      CDS       T00175                                 
Name
(RefSeq) TATA-box binding protein-associated factor 9
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CYME_CMO165C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cme03021]
    CYME_CMO165C
   03036 Chromosome and associated proteins [BR:cme03036]
    CYME_CMO165C
Transcription machinery [BR:cme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CYME_CMO165C
   Coactivators
    SAGA/TFTC/STAGA complex
     CYME_CMO165C
Chromosome and associated proteins [BR:cme03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     CYME_CMO165C
    STAGA complex
     CYME_CMO165C
    TFTC complex
     CYME_CMO165C
    SAGA complex
     CYME_CMO165C
    SLIK complex
     CYME_CMO165C
SSDB
Motif
Pfam: TFIID-31kDa Bromo_TP
Other DBs
NCBI-GeneID: 16995666
NCBI-ProteinID: XP_005537565
UniProt: M1V9H8
Position
15:complement(427002..427823)
AA seq 273 aa
MSKVEVAGAPLDARILASILSSMGIEEYDDRVIHQLLELLYRYVAEVLTDARDLSEHAHR
GQGKVSRTGSGVSAAAAAGDMAEIDVNDVKLAIELKLQREFVQPPPREVQMLHARELNAV
PLPVFRGDRDTVELPPEELQLTAPVFRVTAQKRKRELNKRALPVATDGGGYSTVLAVSDA
VNQRVAIVTHAHSDTAGNLGDSPQTRMIESEPLAEEAFARASPSVDESSEHEEAMVTNSP
EADPERTGEPSSAPTAAADAARAEPASRRSRRR
NT seq 822 nt   +upstreamnt  +downstreamnt
atgagtaaagtggaggtcgctggagcgccgctggacgcgcgcatactcgcgagcatcctg
tcatcgatgggcatcgaagagtatgatgatcgcgtcatccaccaactactggagcttctc
tatcgctatgttgcagaggtcttgacagacgcgcgggacttgtcagaacacgctcatcgt
ggccagggcaaagttagtcgcactggttctggagttagcgcagctgctgcagctggtgac
atggctgagatcgacgtgaacgacgtgaagctagctattgaactcaagctacaacgagag
ttcgtgcagcctccaccgcgagaagtgcagatgcttcacgctcgtgaactgaatgcggtt
cccctgcctgtattcagaggcgatcgcgatacagtggagctcccgcccgaggaactccaa
ctcaccgctccggttttccgggtgacggctcagaagaggaaacgggaactcaataaacga
gcattgccagtagccacagacggaggcggctactcaaccgtgctcgcagtgtccgacgca
gtcaaccagcgagtcgccatcgtgacgcatgcgcacagcgataccgctggtaacttgggc
gacagtccgcaaacgcggatgattgaatcggaacctctagcggaggaggcatttgcgaga
gcatcgccttctgttgatgaatcgtcagagcatgaggaagccatggtgacgaattcgccg
gaggcggatccagagcgcaccggggaaccgagcagtgcgcccacagccgctgcagatgcc
gccagagcggaaccagcatcccgtcgatcgcgtcgtcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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