KEGG   Cyanidioschyzon merolae: CYME_CMO270C
Entry
CYME_CMO270C      CDS       T00175                                 
Name
(RefSeq) plant organellar DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cme  Cyanidioschyzon merolae
Pathway
cme03030  DNA replication
cme03410  Base excision repair
cme03420  Nucleotide excision repair
cme03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CYME_CMO270C
   03410 Base excision repair
    CYME_CMO270C
   03420 Nucleotide excision repair
    CYME_CMO270C
   03440 Homologous recombination
    CYME_CMO270C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cme03032]
    CYME_CMO270C
   03400 DNA repair and recombination proteins [BR:cme03400]
    CYME_CMO270C
Enzymes [BR:cme01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CYME_CMO270C
DNA replication proteins [BR:cme03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CYME_CMO270C
DNA repair and recombination proteins [BR:cme03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CYME_CMO270C
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CYME_CMO270C
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_A_exo1 Anoct_dimer
Other DBs
NCBI-GeneID: 16995747
NCBI-ProteinID: XP_005537647
UniProt: M1UUP9
Position
15:686142..688988
AA seq 948 aa
MRCAASFQRPAESYHDLQPTLTLRTECNQRSSPVKRLETRPVIMRLGVGSCRLWLGAFVY
ALRPALRRDGNVWQQWRRAHALVPAVPRRRWLCANARRSAASTWDEETDVVGDEFSSVNL
VQASAAKITEGDEFTAQRLQLLNAPERESAAATLERSPPPGVTVVRNRASALRVIDRLWQ
LQKESELLYGRRAASVPRRWRLITEGCTHSNGNGVLHEDNTLQCKRLYPPTAADWMEHSQ
CYHAWDTETIGIDPTEDSPVGKGQVICLSAFCGPRVDFGNGPRLWIDNFGDAQGTLDYFK
SYFENEEIPKVWHNYSFDRAVLYNHGIDCRGFGGDTMHMSRLLDAARLRYSLEALTEDFL
LRKKRSMRELFGRPRILKNGKPGKEIIVPSTSELQMDPETMYHWVQYSTYDAEATWYLRD
KFERLLREQEILGSERTMYDLYTECFVPFGAVLTDMERIGFKIDIARLQDAQRVAEADRQ
RYTAMFREWAARYCADAIHMNAESENQKRQFFFAPVRNKKTDELLPAERTFEVENTEQVV
ESAGKKPRKKRTIQISGLGLPPVAFTASGWPACTAVVLRKLAGTPSASPAQGGLLYDFLT
KERRESAEDALAACKAVEALLEAGAVGTLLDSFIDPLQKMVDKNHRIHASLNLNTETGRL
SSRRPNLQNQPALEKDRYRVRDAFTCEEGNTLIVADYGQLELRLLAHIANCRSMIEAFKA
GGDFHSRTASSMYPYIAESVARGDVLLEPEPNANGQATSSKPLLKDVYAGERRRAKTLNF
SIAYGKTPAGLARDWGTSLKEARETVDAWYRDRPEVRAWQERAIKFAQTHGFVKTLLGRR
RPLPEINSPNTNAARHAERAAINTPLQGSAADVVMKAMLLIHSNARLAELGWRMILQVHD
EIILEGPEETVEEAEAIVVRLMRQPFREPLRVDLAVSVAHAKTWFRAK
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgcgctgcgctgcgtcgtttcagagacccgcagagagctaccatgatctgcagcctacg
ctgacattgcgaacggagtgcaaccaacgcagttccccggtgaagcgtcttgaaacgcgt
ccagttatcatgcggttaggcgtagggtcttgccggttgtggctgggcgcattcgtgtac
gcactgcgtcccgctctgcgaagagacggaaacgtttggcagcagtggcgccgggcacat
gccctcgtgcctgctgtgcctcgacgacgctggctgtgtgcgaacgcccgccgttcggct
gctagtacctgggacgaggaaacggacgtggttggtgacgagttcagctccgtgaacctg
gtacaggcgagcgcggcaaagataaccgaaggcgacgagttcaccgcccagcgactgcag
ttgctgaacgcgcctgagcgcgagagcgctgccgccacgctcgaaaggtcaccgccgcct
ggtgtaaccgtcgtgcgcaaccgcgcaagtgcgttgcgcgtgattgatcggctttggcaa
cttcagaaagagtcggagcttctttacggacgtcgggctgcttcggtgccgaggcgatgg
cgtctcataacggagggttgtacccactcgaatggcaacggtgtgctccacgaggacaac
acgctccagtgcaagcgtctgtatccaccgaccgcagcggactggatggagcactcgcag
tgttatcacgcttgggatacggaaaccattggcattgatccgacagaggactcccctgtt
gggaaaggtcaggtgatctgtctctcggcgttctgtgggccgcgtgtagactttgggaat
ggaccccgcctttggatcgacaattttggcgacgcacaaggtacgctggactatttcaag
tcttatttcgaaaatgaggaaattcccaaagtttggcataactacagcttcgaccgagcg
gtcctttataaccacggcatcgactgtcgaggattcggcggcgataccatgcacatgagc
cgactattggacgcagcgagactgcgttactctctggaggcgctcacggaagactttctg
ctgcggaagaaacgcagcatgcgggagctgttcggtcggcctcgtattttgaaaaatgga
aaaccaggcaaggagattatcgtaccgtccaccagcgaactccagatggaccctgagacc
atgtaccactgggtgcagtatagcacctatgatgccgaggcaacctggtatctgcgcgat
aaatttgagcgtctgcttcgtgaacaggagatcctcggctcggagcgaaccatgtatgac
ctttatacggaatgtttcgttccttttggtgcggtcttaaccgatatggaacgcatcggc
ttcaagattgatattgcgcgactccaagatgcgcaacgtgtagccgaagccgaccgccaa
cgttacactgcaatgtttcgagaatgggcagcgcgctactgtgctgatgcaatccacatg
aatgccgagtcggagaatcaaaagcgccaattctttttcgccccggtccggaacaagaaa
accgatgaattgttgccagcagagcgcactttcgaggtcgagaacacggaacaggtcgtg
gagtccgcggggaagaagccccgcaagaagcgaaccatacaaatatccggtctcgggctg
ccgcccgtggcgttcactgcaagcggttggccggcttgcacggcggtggtgctgcggaaa
ctggcgggcacgccgagcgcgagtcccgcccagggcgggctcctgtatgactttctcacc
aaagagcgacgggagagcgcggaggatgcgcttgcggcgtgcaaagccgttgaggcgcta
cttgaggctggtgcagtcggcaccctgctcgacagtttcatcgatccgctgcagaagatg
gtggataagaaccatcgcattcatgcgtcgctcaacttgaacacggaaacaggtcggttg
tcgtcgcggcggccgaatctgcaaaatcaacccgctctagagaaagatcgctatcgtgtt
cgggatgctttcacttgcgaggagggcaatacgctgattgtagcggactatggccaactc
gagctgcgattacttgcgcatatcgccaactgccgcagcatgattgaggcgtttaaggct
ggtggcgactttcattcgcgcacggcgagcagcatgtacccgtacatcgcagaatccgtt
gcccgcggcgacgtgcttcttgaacccgagcccaatgccaacggacaggccacttcgtcg
aagccgctgctcaaggatgtatacgcaggggagcgacgtcgggccaaaacactcaatttt
tcaatcgcatacgggaaaacgccagctgggctggcgcgagactggggcaccagcctgaaa
gaagctcgcgagaccgtagatgcttggtaccgggatcgacccgaggttcgtgcctggcag
gagcgcgctattaagttcgcgcaaacccatggattcgtgaaaacgctgctgggtcgacgg
cggcctctgccggagatcaactccccgaatacgaatgcggctcgccatgcggaacgtgca
gcgattaacacccctctccaaggtagcgcagccgatgttgttatgaaagccatgctgctc
attcatagcaacgcacgtttggctgaacttggctggcgaatgatcctccaggtccacgat
gagatcatcctcgaggggcccgaagaaacagtcgaagaagcggaagcaattgtcgttcgg
cttatgcgtcaaccgttccgtgaaccgctgcgcgttgacctcgctgtttcggtcgctcac
gcgaagacgtggtttcgtgcaaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (85)   

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