KEGG   Cyanidioschyzon merolae: CYME_CMS145C
Entry
CYME_CMS145C      CDS       T00175                                 
Name
(RefSeq) similar to shuttle craft like transcriptional regulator NFX1
  KO
K12236  transcriptional repressor NF-X1
Organism
cme  Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:cme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cme03000]
    CYME_CMS145C
   04121 Ubiquitin system [BR:cme04121]
    CYME_CMS145C
Transcription factors [BR:cme03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    CYME_CMS145C
Ubiquitin system [BR:cme04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   NFX1 proteins
    CYME_CMS145C
SSDB
Motif
Pfam: zf-RING_2 R3H
Other DBs
NCBI-GeneID: 16997612
NCBI-ProteinID: XP_005538807
UniProt: M1UWU1
Position
19:complement(374924..377332)
AA seq 802 aa
MPCQSSRESVQVDESLQQSLNRGTFECVICLCRIGRTEPIHTCCECGNCVHWNCFQRWAK
KVPEVAKRNVQDEYPCPACQTWQVLLLEPRCFCGKVVLDGQRRPPSANAHSCGRRCGRKL
CIHGGCSQVCHPGPCAPCPGTIEVSCRCGREKFTYRCAEYRKQLVDTCTERLQCGRPCGF
EKSCGHRCSKICHPMNAHNGAAAEDEACDETVWMQCALHDQPFPMRCPGVRHASPVVCTE
ILQHHCRCGSERFSLTCIDLMDVAYDPGILLCDRLCGKLLSCNRHRCSERCCNDTRHECM
RSCNRAADGRRSARCSHPCPLRCHQGACPPCATVSHEPLVCACGRQRIEPPVPCGTLPPI
CNAPCQKERPCRHPCALGRCHAGDCPKCLHLVLRECIGGHKEHRQIPCSAKPFRCFRACN
QLLPCGRHRCKRRCHDWRNPDDSCTKGDPTHPCEMPMSDTRQVCALPCGHSGMHQGGALS
AVRPGPSISDVSMEADRPTEDAFARSQPVCKELNANEPAATPGEVAGTCSAPVWTGGSVV
VEDIREESCPGSSPTMNRKRDGQEAEAETPYSLFLLEMARNHWEEFLELERLLGMVATAT
QLRWQVVALNATNARMRAAQHELASLHYKLHTRSAASHVDRHVVVTHLHGVSRVPKPLLT
QVVQQKEFLELKKERDRASRCLAVRVSPFIPAARTGPRSTTGGAANDASNDMPLWSKDFR
SHAGNYSIIARNVDGFDFIEFSTPERCQSAWLSLRWKRHLVARKVSESELAKLNSVEMSR
QGVTEVRHPLHARTADEHEIED
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccttgtcagagctcccgagagtctgttcaagtcgacgagagcttacagcagtctctg
aacagaggcacttttgagtgtgttatctgtctatgtcggatagggcgaacggagccgatc
cacacgtgctgtgagtgcgggaactgtgtccactggaactgtttccagcgctgggctaaa
aaggttcccgaagttgcgaagaggaacgtgcaagacgagtacccttgccctgcttgtcag
acttggcaggttttgctgctcgagcctcgttgtttctgtggtaaggttgtcctggacggt
cagaggcgaccaccaagcgcgaacgcgcactcgtgcgggcgtcgttgtgggagaaagcta
tgtatacatgggggttgttctcaagtttgccatccaggcccatgcgcgccatgtccaggc
acaatcgaggtatcatgtcgctgcggacgtgaaaagtttacgtatcgctgtgctgagtac
cgcaagcagctcgtcgatacctgtacggaacgactccagtgtggtcggccttgtggcttc
gaaaagagctgcggacaccgctgtagcaaaatctgtcatccgatgaatgcgcacaacggc
gctgctgccgaagacgaggcctgcgacgaaaccgtatggatgcaatgcgctctgcacgac
cagccgtttccgatgcgctgcccaggagtgcgccacgcttcgcccgttgtctgtactgaa
attctccagcatcactgtcgatgcggctcagagcgtttctctctgacctgcatcgatctc
atggacgtagcgtatgatccggggattttactgtgcgatcgcctgtgtgggaaacttctg
agctgcaaccgtcaccggtgcagtgagcgatgctgtaatgatacccgtcatgaatgtatg
cggagctgcaaccgcgccgccgacggcagacgctccgcacgatgctcgcacccatgtcca
ttgcgttgccaccagggcgcgtgtccaccgtgcgccactgtgtcgcacgagccccttgtt
tgtgcctgcggtagacagcgcattgaacctccagtaccatgcggtacactgccaccgata
tgcaatgcgccctgccaaaaggaacgaccatgtcgacatccgtgcgcgctgggccgttgt
cacgcaggtgattgtccgaaatgtctacatttagtgctacgtgaatgcattggaggtcac
aaagagcaccgtcagataccgtgcagtgcaaagccgttccgctgttttagagcttgcaat
cagctgctgccctgtggacgccatcgatgcaagcggcgctgccacgactggcgaaaccca
gacgactcctgcaccaaaggcgatccgacacatccatgcgaaatgcccatgtccgataca
cggcaagtctgcgcgctgccgtgcggccactcggggatgcatcagggaggtgcactctcc
gcggtgcgtccaggtccgagtatatcggacgtatccatggaggcggacaggccaacagaa
gacgcatttgcgcgctcgcagccggtgtgcaaagaactgaatgcgaatgaacccgccgcg
accccaggcgaggtcgcaggtacctgcagcgctcccgtatggaccggaggcagcgtcgtc
gttgaagatatcagagaggagtcgtgtccgggatcgagtccaacaatgaataggaagcgc
gatggtcaggaggctgaggcagaaacaccgtactctctgtttctgctagagatggctcga
aatcactgggaggaatttctcgagctggagcgcttgcttggcatggttgcaacagcgacc
cagttacggtggcaggttgtggcgctcaacgcaacgaacgcgcgcatgcgcgcagctcag
catgagttggcctcgctgcactacaagctccacacccgctcggcagcgagccacgtagac
cgccacgtcgtcgttacgcatctgcatggagtgtctcgcgtaccgaaaccgcttctcacc
caagtcgttcagcaaaaggagttcttggagttgaaaaaggagagagaccgggctagtcgc
tgtctcgctgtccgcgtttcgccctttatcccggcagctagaaccgggccgcgctcaaca
accggcggtgcggcgaacgatgcctcgaacgacatgccgctgtggtcgaaagacttccgc
tcccatgccggaaactacagcatcatcgctcgcaatgtggatggctttgactttatagag
tttagcactcctgaacgctgtcagtcggcctggctatctctccgttggaagagacatctc
gttgcgcggaaggtttccgaatccgaactcgcaaaactgaattccgtcgagatgtcgcgg
caaggtgtcaccgaagtgcgtcaccctttacacgctcgcaccgcagacgagcacgaaatc
gaggactaa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (189)   
   KEGG ORTHOLOGY (1)   
   RefGene (185)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (198)   

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