KEGG   Cyanidioschyzon merolae: CYME_CMT038C
Entry
CYME_CMT038C      CDS       T00175                                 
Name
(RefSeq) similar to retinoblastoma-family protein
  KO
K06618  retinoblastoma-associated protein
Organism
cme  Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:cme00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cme01009]
    CYME_CMT038C
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cme03000]
    CYME_CMT038C
Protein phosphatases and associated proteins [BR:cme01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     CYME_CMT038C
Transcription factors [BR:cme03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    CYME_CMT038C
SSDB
Motif
Pfam: RB_A RB_B
Other DBs
NCBI-GeneID: 16998157
NCBI-ProteinID: XP_005539102
UniProt: M1UXA2
Position
20:92830..95580
AA seq 916 aa
MLDAKPGVEQWVRRLAAQAALDERTVDEALQLVEQVRFPEDEASWAACALLVAVQSPETA
GHVLGAFLRCADVTPQPSPKGRGNCISDFFERAKMISPTAQRMEQLLVVIANVHRKFVEL
YQGDIFDEERAWICFLTALALLASRGGPLGELPDLVSAYHLMVAVIRRLQLKMLKQPDIL
EEDVERYLARLETTMIPWDDTSGMQDLYNSVFVGRLGFDGRILLQAHHLGQMLCEMHKFP
AKDAAPTLVQRVRPERCVPRFSRVISETLSSLRAKRQRMESTPLSSSSSSSSSMAVKPSL
HAEQVPPARGASAEDEQHSSTAPGPKSTALIYNDAETPMPSTQCVYPDQKDSADAVFDEL
AAAAALQNLARPREADSAGGKVAAALRTPQRAALSTQNPNRVPPPSPRRTPIRGGIASVR
WVRAITALASRVCDNLRETYGGLGVDPLGFANSATGYLLQSFTERFHPETAEQRIGEVMA
VYWYALESILNAETQRMNGSTDFVPKLLALQPFHKALLLCAVETVCASYGIRDEIHFEHL
LESLKLSPFDFIKIIGAYVLNVENLPPQAKRRLAACQECVLCVLAWQSDSLLVRALRTGD
MSSIPTAALDLFFDKLLMQADYRILNVCARLGICEEAFENRVWSIFKLALTEQWELFIGR
HLDTVLLCCFYGAAKTQRSLQFKFVDIIRAYRAVVADSECIRLSDSLQTVYRDLALDDGG
RGDIIAFYNLIFVPHMKRYLLGQTTPEGPAAALSMSSTPERRRESESELDAHHVNAPHAS
PVSSPGLGPRIVDKIISSPLRLPRIRSQSGVVSLRASPATSPRNTFPVWTLPTYSPQSTL
TPLASSRRAALLAARLPPNASPQFQAPRPEGSPSTRTQAAAAEAETQAEAAPASPHQPLA
EQRITSPPGRRKLVFF
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgttagacgcgaaacctggcgtggagcagtgggtgcggcgtctggcagcgcaagcagcg
ctagatgaaagaactgtagacgaagcgctgcaactggttgaacaagttcgtttccctgaa
gacgaggccagctgggcagcatgtgcgcttctagtggcggtacagagtcctgagacggct
ggacacgtgctcggggcgtttctccgctgtgccgacgttacaccgcaacctagtccgaaa
ggcagaggtaactgtattagcgactttttcgagcgggcgaagatgatctcacccactgct
cagcgcatggagcagctcctcgtggttattgcgaacgtccaccgcaagtttgtggaactt
tatcaaggcgacattttcgacgaggaacgggcctggatatgttttctcacggctctcgcg
ctgttggcgtcacgaggcggcccgctgggcgagcttcctgacctcgtgagtgcctaccat
ctaatggtcgctgtcatccgccggttgcaactgaagatgcttaagcagccagatatcctc
gaggaagatgtcgagcgatacttggcacgactcgaaacgacgatgatcccatgggatgac
acgagcggcatgcaggacctctacaacagcgtctttgtcggccgcctcgggtttgacggc
cgcattctactgcaagcacaccatctgggacaaatgttgtgcgaaatgcataagtttcct
gccaaggacgcagcacccactttggttcagagagtgagaccggagcggtgcgtcccgcgc
ttctcacgcgttatcagcgaaacgctatcatcgcttcgtgcaaaacggcagcgtatggag
tcgacaccattatcgtcgtcgtcgtcatcgtcgtcgtcgatggcggtgaaaccatctctg
cacgccgaacaggtgccacctgcccgtggcgcatcggctgaggatgagcagcattcatct
acggcaccaggtccgaaaagcaccgctttgatatataatgatgctgaaacgccgatgccc
tctactcagtgcgtatacccggatcaaaaggactccgccgatgctgtttttgatgagctg
gcagcggccgcggcgctccagaacctggctcgcccgcgagaagcagattccgcgggcggc
aaagttgctgctgcccttcggacaccgcagcgagctgcactctctacgcagaaccccaac
cgagtgccgccaccctcgccacgtcgcaccccgattcggggcggtattgcctctgttcgt
tgggtgcgcgctataaccgcccttgcttctcgagtttgtgataatctccgggaaacttac
ggtggacttggagtcgaccccttgggtttcgcgaattcggcaactgggtatctgctccag
agctttacggagcgatttcatcccgaaactgcagagcagcgtatcggggaagtcatggca
gtgtactggtacgcactggaaagcattttgaacgctgagacgcaacgcatgaacggctcg
acagactttgtgccgaaactacttgcgctgcaaccttttcacaaggcgctgctcctgtgt
gccgtcgagacggtgtgcgcatcatacggcatccgagacgaaatccactttgagcacctg
ctggagtcgctgaagctctcgccgttcgatttcatcaaaatcattggcgcctacgtgctc
aatgtggagaatctcccgccccaggcgaaacgtcgtcttgcagcctgccaggagtgcgtg
ctctgcgtgctggcctggcagtcggactcgttactcgtacgcgcacttcgcacgggcgac
atgagctccataccaacagcggcattggatttgttctttgacaagctgctgatgcaagcg
gattatcgcatcctgaacgtctgtgctcgcctcggcatctgcgaagaagcgtttgaaaat
cgggtgtggtcgattttcaaactggcgctcacggagcaatgggagctcttcatcgggcgc
catcttgatacagttctactttgctgcttctatggagcagcgaagacgcagcgttccctg
cagttcaaatttgtggatatcattcgagcgtatcgggcagttgttgcggactctgaatgc
atccgactgagtgactcgctgcagacagtgtatcgggatcttgccttggacgatggtgga
cgtggcgacattattgccttttacaaccttatttttgttccacatatgaagcgctacctg
ttgggacaaactactccagagggtccagccgctgctctctcaatgagcagtacacccgaa
aggcgccgtgaatccgaatctgaactcgatgcacatcatgtgaatgctccgcacgcgtca
cccgtatcttctcctggcttgggaccgcgtatcgtggacaagatcatttcgtcgccgctg
cgtctaccacgaatacgtagccagtccggagtggttagccttcgcgcgagtcccgcaacg
agcccgcgaaatacattcccagtttggacgctgccgacgtattctccgcagtctacgcta
acgccccttgcgtcctcgcgacgagcggcgcttctggcagcgagattgcctccgaacgcg
tcgccacagttccaggccccacggcccgagggcagccccagcactcgaacccaagcggcg
gcggcagaggcggaaacgcaggcggaggcagcgcctgcgtcaccgcaccagccgttggcc
gagcagcgcatcacatccccgcctggacgccggaaacttgtctttttctaa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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