KEGG   Caminibacter mediatlanticus: FE773_05350
Entry
FE773_05350       CDS       T05985                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cmed  Caminibacter mediatlanticus
Pathway
cmed03420  Nucleotide excision repair
cmed03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FE773_05350
   03430 Mismatch repair
    FE773_05350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmed03400]
    FE773_05350
Enzymes [BR:cmed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FE773_05350
DNA repair and recombination proteins [BR:cmed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FE773_05350
   MMR (mismatch excision repair)
    Other MMR factors
     FE773_05350
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_11 ResIII DEAD
Other DBs
NCBI-ProteinID: QCT94621
UniProt: A0A4P9DU03
Position
969291..971312
AA seq 673 aa
MPLSKLNTEQFQAATAPFGFNLVIASAGTGKTSTIVGRIAHLLENGLKPEEILLLTFTNK
AAIEMKERVSRVISYAKNIEAGTFHSVSYKWLKKLNKNIVLKQPKDLKILFKSIYDKRDF
NRILGEEKPYSANYLFDLYSLFINSNEEDFTSWLIKKAPSQEEYALIYEDIFDEYERVKK
EHNLVDFNSLLLEMINALNSGIDNPFREILVDEYQDTNPLQNRFIEAVRKDSLFCVGDYD
QSIYAFNGADINIISTFDKRYPNAKVYTLKKNYRSYGEILDVANRVIKNNPRIYPKSLEV
TRGFSGEYPKLLMYSDTFEEYKDIASRILTSTTNKEDIAILFRNNSSADAIEAMLREKGI
ECRRKGGVSFFDSREIKVTLDLLTFLVNPKDIMAFIHIFEYAKGIGSAIASEIFEALTIL
GNGHAIDGFLNPDLSKKVFTKKKTSYQLGLFDDFSVLGSISKFKNLGFEEEFLQNPILKH
PKLSIEGAEFLYNFYLLLKKLKRFKNPQSIFNEVINSKVLCHIISSLAYTRSKDKNGKVD
EEKFEEAKVKIKNKITILGNLLKNYTDLEKFLNAMVLGASEMSEGRGVNLLTVHASKGLE
FKEVYIVDMMEGRFPNIKLSKLAGGIEEERRLFYVAVTRAKDKLYFAFAKRDRIRNQEYE
ISRFLIEAGYNIN
NT seq 2022 nt   +upstreamnt  +downstreamnt
ttgcctcttagtaaattaaatactgaacaatttcaagctgcaacagctccttttggattc
aatcttgttattgcaagtgcagggactggtaaaacttctactattgttggaagaattgca
catttattagaaaatggactaaagccagaggagattttacttttaacttttacaaataaa
gctgcaattgagatgaaagagagagtctcacgagttatttcttatgctaaaaacatagaa
gcagggacttttcattctgtaagttataaatggctaaaaaaattaaataaaaatattgtt
ttaaaacaaccaaaagatttaaaaatcctttttaaatcaatttatgataaaagagatttt
aatagaattttaggtgaagaaaaaccatattcggctaattatttatttgatttatattca
ctttttataaactcaaatgaagaagattttacctcttggcttataaaaaaagctccaagt
caagaagagtatgcattaatatatgaagatatttttgatgagtatgaaagagtaaaaaaa
gaacataatttagttgattttaattcacttttgcttgaaatgattaatgctttaaattca
ggaatagataatccttttagagaaattttagtagatgaatatcaagatacaaatcctttg
caaaatagatttattgaagcagttagaaaagattctcttttttgtgtaggagattatgac
caaagtatttatgcatttaatggtgctgatataaatattatttcaacatttgataaaaga
tatcctaatgcaaaagtttatactttaaagaaaaattatagaagctatggagagatttta
gatgttgcaaatagagttataaaaaataatcctcgaatttatcctaaatctcttgaagtt
acaagaggatttagtggagaatatccaaaacttcttatgtatagtgatacatttgaagaa
tataaagatattgcaagtaggattttaacttcaactacaaataaagaagatattgctatt
ctttttagaaacaattcaagtgcagatgcgattgaagctatgcttagagaaaaagggatt
gagtgcagacgaaaaggtggagttagtttttttgattcaagagagattaaagtaactctt
gatttgcttacttttttagtaaatccaaaagatattatggcttttattcatatttttgaa
tatgcaaaaggaataggaagtgcaattgcaagtgagatttttgaagcattaactatttta
ggtaatggacatgcaattgatggatttttaaatcctgatttgtcaaaaaaggttttcaca
aagaaaaaaacatcataccaacttggactttttgatgattttagtgttttagggagtatt
tctaaatttaaaaatttaggatttgaagaagagtttttgcaaaatccaattttaaaacat
ccaaaactatcaattgaaggggcagagtttttatataacttttatttgcttttaaaaaaa
cttaaaagatttaaaaatcctcaatcaatttttaatgaagttataaattcaaaagtttta
tgccatattatttcaagtttagcatatacacgctcaaaagataaaaatggcaaagttgat
gaagaaaaatttgaagaagcaaaagtaaaaattaaaaataagataacaattttaggtaat
cttttaaaaaactatactgatttagaaaaatttttaaatgcaatggttttaggtgcgagt
gaaatgagtgagggaagaggggttaatcttttaacggtccatgcaagtaagggacttgaa
tttaaggaagtttatattgttgatatgatggaaggaagatttccaaatattaagctttca
aaactagcaggaggaattgaagaagagaggcgacttttttatgtagcagttactcgtgca
aaagataaattatattttgcatttgcaaaaagagatagaattagaaatcaagagtatgaa
ataagtaggtttttaattgaggcaggatataatatcaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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