KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_2229
Entry
CMM_2229          CDS       T00529                                 
Symbol
xseA
Name
(GenBank) putative Exonuclease VII, large subunit (YP_062552.1| exodeoxyribonuclease VII large subunit [Leifsonia xyli subsp. xyli str. CTCB07]; ZP_00225732.1| COG1570: Exonuclease VII, large subunit [Kineococcus radiotolerans SRS30216]; ZP_00057468.1| COG1570: Exonuclease VII, large subunit [Thermobifida fusca]). pfam02601, Exonuc_VII_L, Exonuclease VII, large subunit. This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyses exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.; High confidence in function and specificity
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CMM_2229 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmi03400]
    CMM_2229 (xseA)
Enzymes [BR:cmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     CMM_2229 (xseA)
DNA repair and recombination proteins [BR:cmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CMM_2229 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 SnoaL_2
Other DBs
NCBI-ProteinID: CAN02299
UniProt: A5CT74
Position
2522582..2523898
AA seq 438 aa
MSETRSVSMPAADAPTVDAPWPVSVLSGKIKGWIDRLGTAWVEGEITQWGGSGGNVYGKL
KDLDVDATISFTVWSSVRAKIPADLGQGARVVALVKPNYWVKGGTLTMQVLEMRHVGLGD
LLERLERLRQTLRAEGLFDADRKRRLPFLPGCIGLITGKDSDAEKDVLRNAQLRWPSVRF
RVVHTAVQGDRAAGEVTRAIGVLDEDPEVDVIVIARGGGDFQNLLVFSDEKLVRTAAACR
TPLVSAIGHEADRPLLDDVADLRASTPTDAAKRVVPDVSEELSRVQQARARIGMRLTSQV
RGEIDRIEQLRSRPVLSSTAWIVDSRAEELGRYIARSAELAGRVVERGMQQTSELSRQLR
TLSPQHVLDRGYAIVQTADGSALRAPADAPDGTGLALRLAAGALGATSTGPTDDIPSSAA
RLPSSPAPDARPASGAES
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgagcgagacgcgcagcgtgtccatgcccgcggcggacgccccgacggtcgacgcgccg
tggcccgtctcggtgctgtccggcaagatcaagggctggatcgaccggctcggcaccgca
tgggtcgagggcgagatcacccagtggggcggatccggcggcaacgtctacgggaagctc
aaggacctcgacgtcgacgccaccatcagcttcaccgtgtggtcgtcggtgcgcgcgaag
atccccgccgacctcggccagggcgcccgcgtggtcgcgctcgtgaagccgaactactgg
gtcaagggcggcacgctcacgatgcaggtgctcgagatgcgccacgtcggcctcggcgac
ctgctcgagcggctggagcgcctgcgccagacgctccgcgccgagggcctcttcgacgcc
gaccgcaagcgccgcctgccgttcctccccggctgcatcggcctcatcaccggcaaggac
tcggacgccgagaaggacgtgctccggaacgcgcagctgcgctggccgagcgtcaggttc
cgcgtcgtgcacacggcggtgcagggcgaccgggccgccggagaggtcacgcgcgccatc
ggcgtgctcgacgaggatcccgaggtcgacgtcatcgtcatcgcgcgcggcggcggcgac
ttccagaacctgctcgtcttcagcgacgagaagctcgtgcgcacggcggccgcgtgccgc
acgccgctcgtcagcgccatcgggcacgaggccgaccggccgctgctcgacgacgtggcc
gacctccgcgcgtccacccccaccgacgccgcgaagcgcgtcgtcccggacgtctccgag
gagctgtcgcgcgtgcagcaggcgcgcgcccgcatcggcatgcgcctcacctcgcaggtg
cgcggcgagatcgaccgcatcgagcagctgcggtcgcggcccgtcctctcgagcaccgcg
tggatcgtcgactcccgcgccgaggagctcggccgctacatcgcgcgctccgcggagctc
gccggccgcgtcgtcgagcgcggcatgcagcagacgagcgagctctcccgccagctacgc
acgctctcgccgcagcacgtgctcgaccgcggctacgccatcgtgcagacggccgacgga
tccgccctccgcgcccccgcggacgcgcccgatggcaccggactcgcgctgcggctcgcc
gcgggtgcgctcggcgccacctccaccggccccaccgacgacatcccgtcgtcggccgcg
cggctgccctcctcccccgccccggacgcccggccggcgtccggcgccgaaagctag

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