KEGG   Cronobacter malonaticus LMG 23826: AFK66_006235
Entry
AFK66_006235      CDS       T04062                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
cmj  Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:cmj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmj03032]
    AFK66_006235
   03400 DNA repair and recombination proteins [BR:cmj03400]
    AFK66_006235
Enzymes [BR:cmj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AFK66_006235
DNA replication proteins [BR:cmj03032]
 Prokaryotic type
  DNA Topoisomerases
   AFK66_006235
DNA repair and recombination proteins [BR:cmj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AFK66_006235
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C MAPKK1_Int PLC-beta_C
Other DBs
NCBI-ProteinID: ALX77907
Position
1228210..1230846
AA seq 878 aa
MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLDKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGASGIAVGMAT
NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEVDPKNGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRRAPTPSEAKAGLIAQAWELGTV
SAMLERAGDDAARPEWLEPEFGIRDGKYWLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREELELIRDQFGDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRTAGIIAVNLNEGDELIGVDLTAGKDEVMLFSAQGKVVRFKEDAVRPMGRTATG
VRGIRLGEGDSVVSLIVPRGEGAILTATQNGYGKRTAVEEYPTKSRATKGVISIKVTDRN
GPVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSVAEGDDDIAPETDADDDAADDADE
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgagcgaccttgccagagaaattacaccggtcaacattgaggaagagttaaagaactcc
tatctggattacgcgatgtcggttattgtcggccgcgcgcttccggatgtccgagatggc
ctcaagccggtacaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaat
aaagcctacaaaaaatccgcccgtgtcgttggtgacgtaatcggtaaataccatccccac
ggtgattccgccgtctacgataccattgtacgtatggctcagccgttctcgctgcgctat
acgctggtggatggtcagggcaacttcggttctatcgacggcgactccgctgcggcgatg
cgttatacggaaatccgtctggcgaaaatcgcccatgaactgatggccgacctcgacaaa
gaaaccgttgattttgtcgataactatgacggcacggaaaagatcccggacgtcatgccg
actaaaatcccgaacctgctggtaaacggggcttccggtatcgcggtcgggatggcaacc
aacattccgccgcataacctgacggaagtcatcaacggctgcctcgcctatatcgatgat
gaagatatcagcatcgaagggctgatggagcatatccccggcccggatttcccgactgcc
gctatcattaatggccgtcgcggcattgaagaggcgtaccgcaccgggcgcggcaaaatc
tacattcgcgcgcgcgcggaagtggaagtcgatccgaaaaacggccgcgaaaccatcatc
gtgcacgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaatcgccgagctg
gtgaaagagaaacgcgtcgaaggcatcagcgcgctgcgcgacgagtctgataaagacggt
atgcgcattgttattgagatcaaacgcgacgccgtgggcgaagtggtgctcaataacctc
tattcccagacgcagctgcaggtgtctttcggtatcaacatggtcgcgctgcaccacggt
cagccgaagatcatgacgctgaaagagattctggcggcgtttgttcgccaccgtcgtgaa
gtcgtgacccgccgcaccatcttcgaactgcgcaaagcccgcgagcgcgcgcatatctta
gaaggtctggcgattgcgctggccaacatcgatccgattatcgagctgattcgccgcgcg
ccgaccccgtcggaagcaaaagcgggcctcatcgcgcaggcgtgggagcttggcaccgtt
tctgcgatgctggagcgcgccggtgatgacgccgcgcgtccggagtggctggagccggag
ttcggtattcgcgatggcaaatactggctgaccgagcaacaggcgcaggcgatcctcgat
ctgcgtctgcaaaagctcaccggccttgagcatgaaaaactgctcgacgagtataaagag
ctgctggagcaaatcgcagagctgctgcatatcctcggcagcgccgaccgtctgatggaa
gtgatccgcgaagagctggagcttatccgcgatcagttcggcgacgagcgccgcaccgaa
attaccgctaacagcgccgatatcaacatcgaagatctgatcaaccaggaagatgtggtg
gtcaccctgtctcaccagggctatgtgaaatatcagccgctgacggattacgaagcgcag
cgccgcggtggtaaaggcaaatccgccgcacgtattaaagaagaagactttatcgaccgc
ctgctggtggccaacacccacgatacgatcctctgcttctccagccgtggtcgtctctac
tggatgaaagtctaccagttgccggaagcgagccgtggcgcgcgtggacgtcctatcgtc
aacctgctgccgctggaagcgaacgagcgtatcaccgcgatcctgccggtacgcgagtat
gaagaaggcgttaacgtctttatggcgaccgcgagcggcaccgtgaagaaaacggcgctg
accgaattcagccgtccgcgtaccgccggtatcatcgcggtgaacctgaacgaaggcgat
gagcttatcggcgtcgacctgaccgcagggaaagacgaagtgatgctgttctccgcgcag
ggcaaagtggtgcgctttaaagaagacgcggtgcgtccgatgggccgtaccgccaccggc
gtgcgcggtattcgcctcggcgaaggcgacagcgtggtgtcgcttatcgttccgcgcggc
gaaggcgctatcctgacggccacccagaacggttacggtaagcgtaccgcggtggaagag
tacccgaccaagtcgcgtgcgacgaaaggggttatctccatcaaagtgaccgatcgcaac
gggccggtggtcggcgcggtgcaggtcgatgacgctgaccagatcatgatgatcaccgac
gccggtacgcttgtgcgtacgcgcgtgtcggaaattagcgtggtaggccgtaacacccag
ggcgttatcctcatccgtactgcggaagatgaaaacgtggtgggtctgcagcgtgtcgct
gaaccggtggatgacgaagagctcgactctatcgacggcagcgtggcggaaggcgatgac
gacatcgcgccggaaaccgacgccgacgacgatgcggcggacgacgcagacgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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