KEGG   Callorhinchus milii (elephant shark): 103177625
Entry
103177625         CDS       T03088                                 
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04010  MAPK signaling pathway
cmk04210  Apoptosis
cmk04218  Cellular senescence
cmk04620  Toll-like receptor signaling pathway
cmk04621  NOD-like receptor signaling pathway
cmk04622  RIG-I-like receptor signaling pathway
cmk04623  Cytosolic DNA-sensing pathway
cmk04625  C-type lectin receptor signaling pathway
cmk04920  Adipocytokine signaling pathway
cmk05132  Salmonella infection
cmk05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103177625
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    103177625
   04218 Cellular senescence
    103177625
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    103177625
   04621 NOD-like receptor signaling pathway
    103177625
   04622 RIG-I-like receptor signaling pathway
    103177625
   04623 Cytosolic DNA-sensing pathway
    103177625
   04625 C-type lectin receptor signaling pathway
    103177625
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    103177625
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103177625
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103177625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmk03000]
    103177625
Transcription factors [BR:cmk03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    103177625
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank_2 Ank Ank_3 Ank_4 Ank_5 Death
Other DBs
NCBI-GeneID: 103177625
NCBI-ProteinID: XP_007890062
UniProt: A0A4W3J1Y3
Position
Unknown
AA seq 928 aa
MAEDDTYQLRMFNMDNYSAGMFNSPIGPTDPPLQTPDGPYLQIVEQPKQRGFRFRYGCEG
PSHGGLPGASSEKNKKTYPTVKICNYVGNAKIVVQLVTCGKTAVHLHAHSLVGKQCEKGI
CLVQLGPKEMTSVFPNLGILHVTKKNVASTLEQRMVHACIMGYNNGIVIHPEINHRHIET
CSMRELTERERELIHQASIQQAKEMDLSVVRLMFTALLPDSSCRFTRRLEPVISDPIYDS
KAPNASNLRIVRMDKTAGCVTGGDEVYLLCDKVQKDDIQVRFYEENENGGIWEALGDFGP
TDVHRQFAIVFRTPKYRDLTISKPASVFVQLRRRSDNETSEPKPFTYYPQINDKEEVQRK
RQKLLPNFSDHFGGGGGGGMYGGGGGAAGGGGGSSYYPGFQGYTNFSPYPYPPGATNASA
GMKHAAGSSIEDNGDDVGTAGNDFSSNPSESQEQPKTSERPSHSDIEAETTEQGLQAADW
YFTELALNLAERHAKALLDYSITGDVKILLAVQRYLTTVQDENGDAALHLAIIHLQPLVA
QQLLQVIVSIPNNEIVDMRNHLYQTPLHLAVITRQTEVVELLLKAGADMSLLDCHGNSVL
HKAAEQGDVKTLNILLNKKGKALTDLLALPNNAGCYAIHLAVLANSLPCLRQLIAAGAAV
DAQEQRSGRTALHLAVEQENISLAGSLLLEGNAEVDAITFDGCTPLHVAAGRGSAKLSAL
LMAAGADPHIENYEPLDDKTEEFLEEGDDEGIFHGTKPLDIAATQEVYETLNGKPYQPKS
GPAPTFPQGDLGQLDVEAKLELCKLLEVPDPSLNWMTLAQKLGLGILINAFKLSPSPSKT
LLDNYEVSGGTTTELVETLKSMGYIKALDVILKALTKSEDTRSEETVVPEENNVQIQPKP
QQCDSVCDSGVETSFKRLSLSSESFSNN
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggctgaagatgatacataccagcttcgaatgtttaacatggacaactattctgccggc
atgttcaatagtccaattggcccaacagaccctccactgcagacgcctgatggaccttat
cttcagatcgtagaacagcccaaacagcgtggttttcgtttccgttatggatgtgaggga
ccatcacacggaggattacctggtgcttccagtgagaaaaacaagaaaacctacccaact
gttaagatatgtaactacgttggaaatgcgaaaattgttgttcagttggtgacgtgtggc
aaaactgccgtacatcttcacgctcacagtctagtcggaaaacaatgcgaaaaaggaata
tgtctagtccaattgggaccgaaggaaatgacttcagtgtttccaaaccttgggatcctc
catgttactaagaagaatgttgccagcacacttgaacaacgaatggttcatgcttgtatt
atgggatataataatggaatcgtaatacatcctgaaataaatcaccggcacattgaaact
tgtagtatgagagaacttacagaacgtgaaagggaactgatccaccaagcgtccatacag
caggcgaaagagatggacctcagtgtggtgcgactcatgtttacagccctacttccagac
agcagttgtcgttttacacgaagattggaacctgtaatatccgacccgatctacgacagc
aaggccccaaatgcatcaaatctacggattgtaagaatggacaagactgcaggctgtgtg
acaggaggagatgaagtttatctactttgtgataaagtccagaaagatgatatccaggtc
cgtttctacgaggagaatgaaaatggaggaatttgggaagcacttggagattttgggccc
actgacgttcaccgtcagttcgctatagttttcagaactccaaaataccgggacttgact
atttccaagcccgcttctgtatttgtgcagcttcgcagacgatcggataatgagacgagt
gaaccaaagccatttacatactacccacagatcaacgacaaagaggaagtacaaaggaaa
cggcagaaactgttgcccaatttctcagatcattttggaggtggaggtggtggtggaatg
tatggaggaggaggcggagcagcaggaggaggaggtggttcaagttactatcctggattt
caaggatataccaactttagtccttacccatacccacctggggctacaaacgctagtgct
ggaatgaaacatgctgccggttcctcaattgaggacaatggtgatgatgtggggactgct
gggaatgacttttccagtaatccatccgaatcgcaggagcaaccaaagaccagcgagagg
cccagccattcagatatcgaagcagaaaccactgaacaaggactgcaggcagctgactgg
tactttactgagctggcactgaacctggcagaacgccacgccaaagccctgttggattat
tccatcaccggggacgtgaaaatcttgctggctgttcagcgatatctcacaacagttcaa
gatgaaaatggggatgcggctttacacctcgcaatcatccaccttcaaccgttggtggca
caacaactgctacaagtgattgtcagcattcccaacaacgagattgtggacatgaggaat
cacctctaccagactccgttgcacttggcagttatcacaaggcaaactgaagtggtggag
ctgctgctgaaggctggtgctgacatgagtctcctggattgccacggtaactcagtgcta
cataaggctgcagagcagggcgacgtaaagactctgaacatattgctgaacaagaagggc
aaagcactgactgacctccttgctttgccaaataatgcaggatgttatgccattcacctg
gcagtgctagccaacagcttgccatgcttgaggcaattgattgcagctggagctgctgtg
gatgctcaagagcagcggtcagggcgaactgcgctgcatctagcagtagagcaggaaaac
atctccttggctggtagccttctgcttgagggcaatgctgaggttgatgccatcacattt
gatggttgtactccacttcacgtagcagcaggaagaggctcagcaaagttatcagcccta
ctaatggcagcaggtgcagacccacatatagagaattacgagccgttggatgacaaaaca
gaagagtttctggaagaaggtgatgatgagggtatctttcacgggaccaaacctttagac
atagcagccactcaggaggtttatgaaacactgaatggtaaaccgtaccaacccaagagt
ggacctgctccaactttcccacaaggagatttgggtcaactggatgtggaagcaaagcta
gagctctgtaagctgttagaggtgcctgatccaagcttgaactggatgactctcgcacag
aaattgggcctggggattcttattaatgctttcaaactcagcccttccccatcaaagaca
ctgctggataactatgaggtgtctggtggtactactacagagcttgtggaaactttgaag
tccatgggctacattaaagcacttgacgtaatccttaaggcactgaccaaatcagaagac
acaagatcagaggaaactgttgtcccagaagaaaacaatgttcaaattcaacccaagccg
cagcagtgtgatagtgtatgtgacagtggagtggaaacatccttcaagaggctgagtctt
tcatcagaatcattcagcaacaactag

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