KEGG   Callorhinchus milii (elephant shark): 103178071
Entry
103178071         CDS       T03088                                 
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103178071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmk03009]
    103178071
Ribosome biogenesis [BR:cmk03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    103178071
SSDB
Motif
Pfam: EloA-BP1 RNase_T ZIP4_domain
Other DBs
NCBI-GeneID: 103178071
NCBI-ProteinID: XP_042202766
Position
Unknown
AA seq 1236 aa
MSKKTSNPPVCIQLFSLILLVLFGLYCVLKGASFASFSWWYILGASCIVAAAFASFRVYE
TCVLTSLKETTLEHPEPTPKSDDLETDLQHPAAIDYRQQIFSSTFTMPKCPYLTYSVAVP
SEFEFSTAVGLKVLEEQNDLPKLPEVAHTVLELEKVSKAIEVVKSEVQEQQQKLLKYKSL
LECESCDSMTPSTSNDYNYSSPTPKVKNVLPSLQRVSVCEVPDAQFNHIIFNPTSISNSS
VSKSSLSDLTEQAEEKHLFQHETMAISKTTHSECTDLHNKYMNGNHRLCNDLEYDPLMNY
STNFGSQYLGKQNMEEKERFQSSIEHNHEKRHSLASKRARSSESEFSLQESSDELVIDIP
EIPPLVKEFATRKRNAKCLKSAVSLQESDDDDDIPKMPLSIQKPAAKKRFQSERTDNTIL
NLSLIRKVRQRKKAEATALLVDVRKSTTDTDGFSAMKDGNSKCGIYSGDLQEKQKCNSNE
SNPFTLTDGPVNESSRSYGLPSKSGKRKLLGLEMVKKINSGTCANATKPAKSLDQELGSE
FIPDESKVVCQKREAMKEKIYEESHYRASKRLPETSYTNLEVNWQTACTVLKCSGQGAVN
ESKYSDDLGNNTSRINQQGQKWPNQGDIFDDEKGAEGLKKGDESLRNTIDRGEELSLSEE
DVSSSLLDEDLDFSESDPMEECFRIFNESSKQETKDSGTEAKQEKSVCRRVIVPCSLPMP
KLQRRNRIVQVQQQAIQLTANVKGAQAYKAATTSSAAPTCSKKILVQGAIPPPVGAIKSG
RRSATLSSSSHNAHLKERTVSQIAAKVACTLSKRKDYCTSVLQGTNVKRAAPSAERGSNI
SKRVRHRYLNFFIEEFLKICSTEQEAFNKAISEEMMIYEHNPARSVYLNVAVSALKKLRN
LGNLGSTVSNVNSSVKGFPPEVVLEVHVLCKTDTALYWLLKEYVLTEEQLKENGYPRENF
DKPGVALLFGCDKYYGDPLNKICCRCGALFSVTPGGSYISKKECKYHWEPAQTQRVPGGW
EIQYSCCKGSLGSDGCEVAKLCKTSLHVCNRKENLEGFMKTFLRLMPLDGNPGVFAVHCE
MCYTRHGMEIARVSVVNSSFEVVYDTFVKQDNEVIDYNTRFSGVTQKDLANAKQTLREVQ
AVLLSMFSADSIIIGHCLENDLFALKIIHSTIIDTSIVFPHHLGLPHKRAFRNIVAEYLR
HIIHEKAESHDSIGDARECVELMIWKVKEDAKGKRQ
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgtcaaagaaaacgtcaaatcctcctgtctgcatacagttgttctcactgattctcctg
gttctctttggactttattgtgtgttgaaaggagcttcttttgcctcgttcagctggtgg
tacatattgggagcctcctgcattgtggcagctgcctttgcttcattccgtgtgtatgag
acctgcgtattaacatctttgaaagagaccactttggaacatcctgaacctacacctaaa
agtgatgacctggaaactgatctgcaacatccagctgcaatagattacaggcagcaaatc
ttctccagcaccttcaccatgcccaagtgcccatacttgacatactctgtagctgtgcca
tccgaatttgaattctctacagctgtgggtcttaaggtattggaggagcaaaatgatttg
cccaaattgcctgaagttgcgcatacagtgcttgaattggaaaaggtcagcaaagctatt
gaggtggtcaagagtgaggtgcaagagcaacagcagaagcttttgaagtataagtcgttg
ctggaatgtgagtcgtgtgactcgatgaccccatcgacaagcaatgactataactacagc
tctcctactcctaaggtgaagaatgttttaccatctcttcagcgtgtatcagtgtgtgaa
gtaccagatgcccaattcaaccacattatcttcaatccaacttcgatatctaacagttct
gtaagtaagagctcactcagtgatttgactgagcaagctgaagagaaacatttatttcag
catgaaaccatggccatttccaagacaacacacagtgagtgcacagatctgcataataag
tatatgaatggtaatcacaggctatgcaatgacttagagtatgacccactgatgaactat
tctactaattttgggagccaatatctcgggaagcaaaatatggaggaaaaggaacgattt
cagagttccattgagcacaaccatgaaaagaggcactcgctagcatccaaaagagcgagg
agctctgaatcagaattcagtttgcaggagtcatctgatgagcttgttattgatattcca
gaaattccaccccttgtgaaggagtttgcaaccaggaagagaaatgctaaatgtttaaaa
tcagcagtaagcttgcaggaatctgacgatgatgatgatattcctaagatgcctctttcc
attcaaaagccagctgccaagaagaggttccagagtgagagaactgataatactattttg
aatcttagtttaattcgtaaagtaaggcagcgcaagaaggctgaggccaccgctctactg
gtggacgtgagaaaatcaacgactgataccgatggcttttcagcaatgaaggatggtaac
agcaaatgtggtatctattcaggggatttgcaagaaaaacaaaaatgtaactcaaatgag
agcaatccattcaccttaacagatggtcccgtgaatgagagcagcagaagctatgggctt
ccgagcaaatctggaaaaagaaagctgttgggtctagaaatggttaaaaagataaattcg
gggacttgtgcaaatgccactaaacctgcaaaatctctggatcaggaacttggaagtgaa
tttatacctgatgagtccaaagtggtgtgtcagaaacgtgaagctatgaaagaaaaaatc
tatgaagaatcgcattacagagcgtccaagagactgcctgaaaccagctacacaaatctg
gaagtcaattggcagactgcatgcactgtactgaagtgcagtggtcagggtgctgtcaat
gagagcaaatacagtgatgacttgggtaacaatacctcaaggatcaatcagcaaggacaa
aagtggccgaaccaaggtgacatttttgatgatgaaaaaggggctgagggtttgaaaaag
ggagatgagagtctacgaaatacaattgatagaggggaggaattgtctctttcagaggaa
gatgtgtccagttcacttttagatgaagatctagacttttctgaatctgacccaatggag
gaatgctttaggatttttaatgaatcctccaaacaagaaactaaagacagtggaacagaa
gctaaacaggaaaaatctgtctgcagacgagtaattgttccgtgctccctcccgatgccc
aagctacagcgccggaatcgaatcgtgcaagtgcagcagcaggctatacagctgacagcc
aatgtgaaaggtgctcaggcctataaagctgccaccacttcctctgctgctcctacctgt
tcaaagaaaatacttgtgcaaggagcaatccctccaccagttggtgccataaaatcagga
agaaggtctgctacacttagtagctccagccataatgcccacttaaaagagcggacagtt
tctcagattgcggcaaaggttgcatgtactttatccaagaggaaggactattgcacctct
gttctacagggaactaatgtgaagagagcagctccttctgcagaaagaggttctaacatt
tccaaaagggtcaggcatcgataccttaattttttcattgaagaattcttaaagatctgc
tcgactgagcaagaggccttcaataaggcaatctctgaagaaatgatgatctatgaacat
aatccagccaggtctgtatatctgaacgtagctgtaagtgctttgaagaaactccgcaat
ctgggaaatcttggttcaactgtttcaaatgttaactcttcggtcaaaggcttccctcct
gaagtggttctggaagtacatgtgttgtgtaagacagatactgcactgtattggctgctc
aaggaatatgtcttaactgaagaacagttaaaggagaatggatatcctcgagaaaatttt
gataagccaggagttgcactattgtttggatgtgataagtactatggtgaccctttgaac
aagatttgctgccgttgtggagcattgttctctgtaacacctggaggaagttatatctct
aaaaaggaatgtaaatatcattgggaaccagcccaaacacaacgagtgcctggtggatgg
gaaatccaatacagttgctgtaaagggtcattgggatcagatggatgtgaggttgctaag
ctatgcaagacatcattgcatgtctgcaatcgaaaagaaaaccttgaaggttttatgaag
acctttcttaggctgatgccccttgatggaaatcctggtgtgtttgcagtgcactgtgag
atgtgttacaccaggcatggtatggaaattgctcgcgtaagtgtggtcaactccagtttc
gaggttgtttatgatacatttgttaaacaagataatgaggtgattgattacaacaccaga
ttttctggtgtgacacagaaggacttagcaaatgcaaaacagacacttcgtgaagttcag
gcagtgttactgagcatgttcagtgctgattccatcataattggccattgtttagaaaat
gacctatttgcactcaagattatacacagcacaattattgacacgtctattgtcttccca
caccatttgggtttacctcacaagcgagcattcagaaacatagtggcggagtacctcaga
catatcatccatgaaaaagctgaaagccacgactccattggggatgctcgcgaatgtgtc
gagctaatgatctggaaagtgaaggaggatgcaaaagggaaaaggcagtga

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