KEGG   Callorhinchus milii (elephant shark): 103178416
Entry
103178416         CDS       T03088                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:cmk03110]
    103178416
Chaperones and folding catalysts [BR:cmk03110]
 Heat shock proteins
  HSP100
   103178416
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_7 AAA_5 Mg_chelatase Sigma54_activat AAA_22 AAA_14 AAA_16 IstB_IS21 Sigma54_activ_2 Trypan_PARP RuvB_N T2SSE NACHT TsaE nSTAND3 Parvo_NS1 DEAD AAA_18 AAA_29 ABC_tran PduV-EutP AAA_33
Other DBs
NCBI-GeneID: 103178416
NCBI-ProteinID: XP_042202930
Position
Unknown
AA seq 726 aa
MPTAEDGIRSHSTEDDRLLRRLFRSFVPWISVDFTTYKFLLPTVQLLAKGTSCELFHKTT
HSSLRCFSVTPGFAKKNGDHSVDKEKPGHKNGIKITPGNSTKFLGKSHDQFYCPKCGSPG
LHMEAFISPTPFVKCNKCQHFFLMVSPRKDSIKGYREVDLWHTAVEKELQLKLPSPKQIH
NFLDKYVIDQTYTKKVLSVAVYNHYKRIYNNVPPAVTQVDEFCGIQQSTTSSKEMLQMGG
MYPFTSQAHFSSTEQDVLSFPKDLHTTSDSVHLDKSNILLLGPTGSGKTLLAQTLAKCLD
VPFAICDCTSLTQAGYVGEDIESVISKLLQDANYNIPKAQQGIVFLDEVDKIGAVPGIHQ
LRDVGGEGVQQGLLKLLEGTIVNVPERSSRRYRVDTIQVDTANILFVASGAFNGLEKVVS
RRKNEKYLGFGTTSDMGSGRRAVAAAGLAHSSGDNIDEEMKEKDRLLRSLETKDLIEFGM
IPEFIGRFPVVLPLHSLNEDMLVRILSEPQNALLTQYKMLFAMDKCDFTVTEAALRAIAH
KANQRKTGARGLRSILEQLLLEPMYEVPHSNIIGVHIDKEVVNGKKGPEYIRAPTKEDXQ
YSSGSQKQGWMKRADTINNHLLGSVPDIGLTAEVLPTAPGPEPGPEPGPGPEPGPAQGQS
HSGGQSQSQARARARARARPRARARTRARPGPGPEPEPGPAQNQIQARPRARARPSAACE
GQVSSG
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgccaacagcagaagatggtattcggagtcattccactgaggatgacagactattacga
agactgtttagatcttttgttccatggatctctgttgattttacaacctacaagtttttg
ctgccaactgtacaacttctggccaaaggaacatcttgtgaacttttccacaagacaaca
catagctcactaagatgtttttcagtaacccctggatttgccaaaaaaaatggagatcat
tcagtggataaggaaaagcctggtcataagaacggaataaagataacacctggaaactca
acaaagttcttaggaaaaagccatgatcagttctattgtccaaaatgtggaagcccaggg
ctacatatggaggcatttatatcccctacaccgtttgtaaaatgtaacaaatgccaacac
ttcttcttaatggtgagtccaagaaaagattccattaagggttacagagaagtggatcta
tggcatacagctgtcgaaaaagaattgcaactgaaactaccatcaccaaaacaaatccat
aattttttggataagtatgttattgaccaaacctatacaaagaaggttctctcagtggct
gtttacaatcactataaacgaatttacaacaatgtgccacctgcagtcacacaggtcgat
gagttctgtggaatccagcagtccactacatcttctaaagaaatgctgcagatgggagga
atgtatccctttaccagccaagcccacttctcttctacagaacaagatgtattaagtttt
ccaaaggatttacacactacaagtgattctgttcatctagacaaaagcaacatcctcttg
cttggacctacaggctcaggaaaaaccttgttggcccagactttggccaagtgtttggac
gtgccgtttgctatctgtgactgtacatcattaacacaggcaggatatgttggtgaggac
atagaatcagttatttctaaactgctacaggatgcaaattacaatattccgaaagcccag
caaggaattgtatttctggatgaagtggataaaattggagcagttcctgggatacaccaa
cttcgtgatgttggaggagaaggggtgcagcaaggactgttgaaactcttggaaggaacc
atagtaaacgtcccggagcgaagttcgagaaggtatcgtgtggatacaattcaagtggat
accgccaatattctttttgtggcttcaggagcgtttaatggactggagaaagtagttagc
aggaggaaaaatgaaaagtacctaggatttggcacaacatctgacatgggtagtggtcgt
cgggctgtggcagctgctggtttggcccattcatctggagacaatatagatgaagaaatg
aaagagaaagacagactcctgcgtagtttggagaccaaggatttgattgaatttggaatg
attccagaatttattggaagatttcctgtggtgcttccactacatagcttaaatgaggac
atgttagtgcgtattttaagtgaaccgcaaaatgcactgttaactcagtacaagatgttg
tttgccatggataagtgtgatttcactgttactgaggcagccctgagagctattgcacac
aaagctaatcaaaggaagacaggggccagaggattgcgatcaatcttggaacaattgctg
ctagagcctatgtatgaagtccctcattccaatattattggcgttcatatagataaggaa
gttgtcaatggcaaaaagggaccagagtatattcgggccccaacaaaagaggatngacaa
tacagttcgggcagtcagaagcagggatggatgaaaagagctgacaccatcaacaatcac
ttacttggttcagtgccggacatcggactgacagcagaagtgctgccaaccgcgccgggg
ccagagccaggcccagagccaggcccagggccagagccaggcccggcccagggccagagc
cacagcgggggccagagccagagccaggccagggccagagccagggccagagccaggccc
agggccagagccagaaccagagccaggcccggcccagggccagaaccagagccaggcccg
gcccagaaccagatccaggcccggcccagagccagagccaggcccagcgcagcctgtgaa
gggcaagtgtcgtcagggtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (66)   

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