KEGG   Callorhinchus milii (elephant shark): 103178577
Entry
103178577         CDS       T03088                                 
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
  KO
K22383  interferon regulatory factor 2-binding protein
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmk03000]
    103178577 (irf2bpl)
   04121 Ubiquitin system [BR:cmk04121]
    103178577 (irf2bpl)
Transcription factors [BR:cmk03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    103178577 (irf2bpl)
Ubiquitin system [BR:cmk04121]
 Ubiquitin ligases (E3)
  Atypical E3
   103178577 (irf2bpl)
SSDB
Motif
Pfam: IRF-2BP1_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 103178577
NCBI-ProteinID: XP_007891605
Position
Unknown
AA seq 668 aa
MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRA
HGFQDGRSPGPPPVKVQSMAAGKESAQLNHVDGSSKPPQTVLDRYSLATERPRFEYPGIT
HAGRLPNGLNGPNGFPKPEDIPPELNRQSPNSSRRNHGLVPPGPVTVPPNLLPQTTLNGP
VTGALPPHGLLGRPPPSNVLGSSLSVTSQSLSDVNKRPGSVSSTDQERELKEKQRNAETL
AELSESLRNRSEDWTNKPKIVRETLITLSNCTPFDVRFKKDHCLLGRVFAFDAISKPGMD
YELKIYIEYPSGSANVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHSSGDWRLL
GDLLPETVRFFKEVVAAEMLPQSYVDANCPILPTALCNLSRSLPNNSSRTGMRKRKASPE
PDPDAGGVKLEERQQQQQQQWLAGQNEALKLTLAASGAFGPTMAPNRTSPPESSGGGGGG
QNGQSPMAALMSVADTLGNAHSPKDSSGGSNSVHSTTSTRRNSNSPVSPASGGGQRRVAS
RNGEVALAAAAAAAAAGSALPNAHAMEAAHPPNIPDSPMASNGPLCCTICHERLEDTHFV
QCPSVPNHKFCFPCSRESIKAQGANGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDV
KVKKERDP
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgtcttctgcacaagtgtcttcctccaggagacagtcgtgctacctctgcgacctgccc
cgcatgccctgggccatgatctgggactttacggagcccgtgtgcaggggatgtgtcaac
tacgaaggggctgatcgcatcgaattcgtcatcgagacggcccggcagttgaaaagggct
catggcttccaggatgggagatcccccggtccgccgcctgtcaaagttcagtccatggct
gcaggtaaagagagtgctcaactcaaccacgttgacggttcgtccaaaccgccccaaacg
gttctcgatcgctattccctggccacggagagacctcggttcgagtacccaggcatcacc
cacgctggcaggcttcccaacggcttgaatggacccaatggattccccaaacccgaggac
attcctcccgaactcaacagacagagccccaattcttctcgcagaaatcacgggctggtg
cctccgggtcccgtcacggtcccccctaatttgttaccacagaccactctgaacggcccg
gtgacgggcgccctccccccgcacgggctgctcggccgaccccctccttccaacgtcttg
ggctcctctctgtctgtgaccagtcagtcgttgagcgatgtaaacaaacggcccggttcc
gtctccagcaccgaccaggagagggaactgaaagagaaacaacgcaatgcagagacactg
gcggagctgagcgaaagtttaaggaatcgctcggaggattggacaaacaaacccaaaata
gtgcgagagactctgatcactctttccaactgcacaccttttgacgtgcgcttcaagaag
gaccactgtctactgggcagagtgttcgctttcgatgccatttccaagccgggcatggac
tacgagttgaaaatctacatcgagtacccgagcggatctgccaatgtgttctccagcgcc
tcgggggtggccaaacagatgtaccaggactgcatgaaggacttcggccgcgggctgtcg
tcgggcttcaagtacttagagtacgagaagaagcacagctccggggactggcggctgctg
ggcgacctgctgcccgagaccgtgcggttcttcaaggaggtggtggcggctgagatgctg
ccccagtcttacgtcgacgccaactgccccattttgccgaccgccctgtgtaacctgtcc
cggtctctgcccaacaactcctccaggactggtatgcgcaagaggaaagcctcgcccgag
cccgacccggacgcgggcggcgtgaagctggaggagcggcagcagcagcagcagcagcag
tggttggccggacagaacgaagccctgaagctcaccctggcggcgtcgggcgccttcggg
ccgaccatggcccccaaccgaaccagccctcccgagtccagcggcggcggcggcggcggc
cagaacggccagtcgcccatggccgccctcatgtcggtggccgacacgctgggcaacgcg
cactcgccgaaggacagcagcggcggcagcaactcggtccactcgaccaccagcaccaga
cggaacagcaacagccccgtgtcgccggcctcggggggcggacagcgccgcgtggcgtcg
aggaacggggaggtggccctggcggcggcggcggcggcagcggcggcggggtcggccctg
ccgaacgcgcacgccatggaggccgctcacccgcccaacatcccggactcgcccatggcc
agcaacgggccgctgtgctgcacaatctgtcacgaacgcttggaggacacgcacttcgtg
cagtgcccgtcggtgcccaaccacaagttctgcttcccctgctcgcgggagagcatcaag
gcccagggcgccaacggcgaggtctactgccccagcggcgagaagtgcccgctggtcggc
tccaacgtgccctgggctttcatgcagggggagatcgccaccatcctggcgggggacgtt
aaggtcaagaaagaaagggacccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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