KEGG   Callorhinchus milii (elephant shark): 103182257
Entry
103182257         CDS       T03088                                 
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
  KO
K14569  ribosome biogenesis protein BMS1
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103182257 (bms1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmk03009]
    103182257 (bms1)
Ribosome biogenesis [BR:cmk03009]
 Eukaryotic type
  90S particles
   GTPase
    103182257 (bms1)
SSDB
Motif
Pfam: RIBIOP_C AARP2CN GTP_EFTU MMR_HSR1 RNA_helicase AAA_22 AAA nSTAND3 AAA_16 PduV-EutP
Other DBs
NCBI-GeneID: 103182257
NCBI-ProteinID: XP_042192899
Position
Unknown
AA seq 1259 aa
MEEGKQKRLHHQRHSGPKAEKKRKRHLKNLGIGDETDPRKRNPKAFAVQSAVRMAKTFHR
TQDLKIKKHHIPVVDRTPLEPPPIVVVVVGPPKVGKSTLIQCLIRNFTKQKLTDIRGPVT
IVSGKKRRLTIIECRNDINSMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKI
MGVLTHLDSFKNNKQLRKTKKRLKHRFWTEVYQGAKLFYLSGMVHSEYQKQEVRNLGRFI
SVMKFRPLVWQTAHPYILADRMEDLTNPEEVRINQKCDRKVSLYGYLRGTYIRNNSQVHI
PGVGDFSLRDVSFLLDPCPLPEQQKKRSLNEKERLIFAPMSGVGGVVYDKDAVYIDLGGS
HMHSKEEEHGPTHELVQSLIATHTTIDSKMASSKVSLFKDSKPLASEDVEEARCQMPREE
KVIDPESGQVRRKAMFEDEEEEMSESEGEGEEKSEDEAESEEEAEEREDDDDSVDSKIAT
DLRPVKRLRLEENQTGIPAEMPVFADSDDDLEEDSKTEESSDEEKGDREQVNDTEEVDCL
PDDKISREPTTKSRTSTGTVLGGKRLPKVDSGNCTEEEQSSEGEVSDSGGEDLDSKADLD
RQAALSSREGTKDKPLSQEDSKIEELLKEEDYEERIDSTAETAGSLKWKEGLAERAADSF
LRRQQSVTNLRKLVYGAVAEENEDSDEEDILGGLFRVTRSDRDSRQRANGLDSSKFLVEK
PQDWDLEEVMNCIRDCFVTGKWEADKDATALLEEDDSLYGTFQDLETGDVHQGKPKQEDE
EEDEEDEEDKANAAHPEDEKQNKRLAKKRKLKEMFDLEYDGGEGTYFDDLKDEMHKQAQL
NRAEFEDQDDEIRVQYEGFRPGMYVRVEINNVPCEFVANFDAHYPLILGGLKSTEGNIGY
VQMRLKKHRWHKKILKTRDPLIFSLGWRRFQTIPMYYIEDHNGRHRLLKYTPEHMHCSAS
IWGPITPQGTGFLAVQSVAGVTKNFRIAATGVVLDLDKSVTIVKKLKLIGYPFKIYKNTS
FIKGMFSSMLEVAKFEGAAIRSVSGIRGILKKALRTPEGAFRASFEDKLLMSDIVFIRTW
YPVTLPTLYNPVTSLLRPSGEKETWTGMKSLGQLKYDLGIRIKPNKDSLYKPIERQKRHF
NPLHIPKELQKALPFKNKPKILGEKAKVGRDRQRPAVIRDRYEQKISALLGALSTVHGHK
VQKEKVKHRQQRKDFLKQKRKQEEDKIKRQKEARKKIYRVLGQKEKRKVKSSLKGREEA
NT seq 3780 nt   +upstreamnt  +downstreamnt
atggaggaggggaagcagaagaggctgcaccaccagcgccacagcggcccaaaggctgag
aagaagaggaagcgccatctgaagaacctggggatcggcgatgaaactgacccacgcaag
agaaaccccaaggccttcgccgtccagtccgccgtcaggatggccaaaaccttccatagg
acacaggacttgaagattaaaaagcatcatattcccgtggtggaccgcactccccttgaa
ccgccgcctattgtcgtggtggtggtaggacccccaaaggtgggcaagagcactctgatc
cagtgccttattcgcaacttcaccaagcaaaaactgacagacatcaggggtcctgtcacc
attgtttcaggcaaaaagcggcgtctcaccattattgaatgcaggaacgacatcaacagt
atgatcgacttggccaaagtggctgatctcgttttgatgctgatcgatgccagctttggc
tttgagatggagacgtttgaattcctgaacatctgccaggtgcacggcttccccaagatc
atgggggtcctcacccacttggacagcttcaagaacaacaagcagctgaggaagacaaag
aagaggctgaagcacaggttctggacggaggtttaccagggagcaaagctcttttacctg
tcggggatggtccacagcgagtaccagaagcaggaagtccgcaacctgggccgcttcatc
tccgtcatgaagttccggccccttgtgtggcaaacagctcatccctacatcctggccgac
agaatggaagatctgaccaacccagaggaggttcgcatcaatcagaagtgtgaccgcaaa
gtctcgctgtatggctacctgcggggaacatacatcaggaacaacagtcaggttcatatt
ccaggtgtgggtgactttagtcttcgtgatgtcagtttcctcctggacccctgccccctc
ccagaacagcagaagaaacgttctctgaatgagaaggagaggctgatcttcgcccccatg
tccggtgtcggaggggtggtttacgacaaggatgctgtgtacatcgacctagggggaagc
cacatgcactcgaaagaggaagagcatgggcccactcacgagctagtgcagagcctgatt
gccacacacaccaccatcgacagcaaaatggcctccagcaaagtctcgctcttcaaggac
tccaaaccgttggcatcggaggacgtggaggaagccagatgccagatgcccagagaggag
aaagtcattgatcccgagagtggccaagtacgtcgcaaggccatgtttgaggacgaggag
gaagagatgagtgagagcgaaggcgagggggaggagaaaagcgaggatgaggcagagagt
gaggaagaggcggaggagagagaggatgatgatgacagtgtggattcaaaaatagccact
gacctgcgaccagttaaacgtttgaggctggaggagaatcagacgggcattcccgccgaa
atgccagtgtttgcggatagtgatgatgaccttgaagaggattcgaagaccgaggagagc
agcgacgaggagaagggtgaccgagagcaggtgaacgatactgaggaggttgattgtctc
cctgatgataaaatatcaagggagccaacaacaaagtccagaacaagtacaggcacagtt
ctgggtggtaaaaggcttcctaaagttgactcgggcaactgcacagaagaggagcaatca
tcagagggggaggtctctgacagtggaggtgaagatctggactccaaggcagatctggac
aggcaggcagcattgagcagtcgagaggggacaaaggacaagcctctgagccaggaagac
agcaaaattgaagaacttctgaaagaagaggattatgaggaacgtattgattctactgca
gaaactgcagggtcgctgaagtggaaggaaggcctggccgagcgagcagctgattcgttt
ctacggcggcagcagtcggtgacgaatcttcgcaagctggtgtacggagcagtggctgaa
gagaatgaggattcggatgaggaggatatcttgggaggactcttccgtgtcaccaggtcg
gacagggactccagacagagggctaatggtctggactcctcgaagttcttggtggaaaag
cctcaagattgggacctggaggaggtgatgaactgtatccgagactgttttgtcacggga
aaatgggaagcggacaaggatgcaactgctctcctggaggaagatgattctttgtacgga
acatttcaggatctggagacaggagatgttcatcaggggaaacccaagcaggaggatgag
gaggaggatgaggaagatgaggaagataaagccaatgctgcacatccagaagacgagaaa
cagaataagcgtttggcaaaaaaacggaagttgaaggaaatgtttgacttggaatacgac
ggaggggaaggaacgtacttcgacgatcttaaggatgaaatgcataagcaggcccagctt
aaccgtgctgaatttgaagaccaggatgatgagattcgtgtccagtatgagggctttagg
ccgggaatgtatgtccgggttgagattaacaatgttccctgcgaatttgtggccaatttt
gatgctcactatccactgattctcggaggcctgaaaagcactgaaggaaatatcggatat
gtgcagatgcgtttgaagaagcaccgatggcacaagaagatcctgaagacgagagaccct
ctaatcttctcgctgggctggagacgttttcagaccatccctatgtattacatcgaggac
cacaatggaaggcacaggctgctcaagtacacccccgagcacatgcactgctctgcctcc
atatggggtcccatcactccgcagggcactggtttcttagcagttcaatctgtggctggg
gtgacgaaaaacttcaggatcgcagctactggagtggttcttgacctggacaagtctgtt
accattgtaaagaaactgaagctgatcgggtacccattcaagatttacaagaacacttcc
ttcattaaggggatgtttagctctatgctggaagttgctaaattcgagggtgccgccatc
cgcagtgtaagcgggatccgcgggatcctgaagaaagcgcttcggactcctgaaggcgcg
ttccgagcctcattcgaggataagttgctgatgagcgatattgttttcatacgaacatgg
tatcctgtcactttgcccacactgtataatccagtaacatccctactgagacccagtggt
gagaaggagacctggactggaatgaagagcttggggcagcttaagtatgacctgggtatc
agaataaaaccaaacaaggattctctctacaagcccattgagaggcagaagaggcatttc
aatcccttgcacatccccaaggaactacagaaagctcttcccttcaagaacaagccaaag
attctcggggagaaggccaaagtgggacgtgatcgccagcgaccagcagtcatcagagat
agatatgagcaaaagatctccgccctgctgggcgctctgagtaccgtccacggacacaaa
gtccagaaggagaaggtgaagcatcgccagcagcgcaaagactttctcaagcagaagcgg
aaacaggaagaagacaagattaagaggcagaaggaagctcgcaagaagatctaccgggtc
ttaggacagaaagaaaagcgtaaagtgaaatccagcctgaaaggacgtgaagaagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (65)   

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