KEGG   Callorhinchus milii (elephant shark): 103182570
Entry
103182570         CDS       T03088                                 
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
  KO
K01794  chondroitin-glucuronate 5-epimerase [EC:5.1.3.19]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cmk01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    103182570 (dse)
Enzymes [BR:cmk01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.19  chondroitin-glucuronate 5-epimerase
     103182570 (dse)
SSDB
Motif
Pfam: DUF4962 LdpA_C CobN-Mg_chel
Other DBs
NCBI-GeneID: 103182570
NCBI-ProteinID: XP_007897828
UniProt: A0A4W3H0A9
Position
Unknown
AA seq 958 aa
MKTYTHGAATVIFINLFCSLLAQPVNAKSGGSIHFMNGNYDGHPMLYFGKEDVEDLRVKA
RGSHWHIATRIRDAVQIMLLNPVEYLPPWDPKHFSARWNEMYGNNLGVLAIFCVLFPERT
EALEFTLDYMERMASQPSWLVKDAPWDEVPLAHSLVSFATAYDFLYDHLNKSRQERYVEV
IADASRYMYEMSYSRGWGFQYLHNHQPTNCVALLTGSLILMTQGYLQEAYLWTKQVLAIL
EKSMVLLQDVKDGSLYEGVAYGSYTTRSLFQYMFLVQKHFNISHFDHPWIKQHFAFYYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDTYIMRNGSGNWLAQQIRKNRIREGPGTPTK
GQRWCTLHIEFLWYDATLTPVPPRDYGLSKLHYFEDWGVVTYGGAVPTEINRPFLSFKSG
KLGGRAIFDIVHQNKYSQWITGWKNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTYL
NNALTFSPATSESCFPPWEGQVTEACNSKWLKYKHGISGNSHGHIVAALEQNGVVFIRGE
AVGAYSPSLKLKSSQRSLLLLHPQLLLLVDQIHLEEDSPLQKMSAFFHNTDVGFQATSKD
GIHGAFVQQKDGQYRMFWMDDQGNSEKGMLSYKVYPRGYPYNGTYYVNVTTTLRYPITRT
AYIFFGPSVEIQSFTIREDLDRVDLYIATNDKTYTVYLITGETPMKPLFAMVLTDRQKIV
FDRGSAVRTDSLKEVENYVNVVEENLQHAKPVFQQLEKHILARVFNTDNFRKTAERLLKL
SGKKKTEEAIEKLFSISRAQSKAKKTRKGKSEGDKFSNNLPDIFAQIEMNEKRERKKLVE
QLKEESDSNERNEDVREFFDFKDLPYVKPEKAINNKVARNRYVNPRATIRSTAQSLSASY
TRLFLILNIATFFFLLALQLIRFQKAPSLHAQRFLYAILLLDCFVLLCLYSSCSQAQC
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgaagacatacacacatggagcagctactgtaattttcatcaatctcttctgctccctg
ttggcgcagcctgtgaatgcaaagtctggtggcagtatccattttatgaatggcaattac
gatggtcaccccatgctgtactttgggaaggaagatgtggaagatctgcgggtcaaagct
cgaggctcccattggcacattgcaaccaggatccgggatgcagtacagattatgttgttg
aacccagtggagtacttgcctccctgggatccaaaacattttagtgcccgttggaatgaa
atgtatggcaataacctgggagtgctggctatattctgtgtgcttttccctgagagaact
gaagctctggagtttaccttggattacatggagaggatggcatctcagcctagttggctg
gtaaaggatgctccatgggatgaggttcctttggctcactccctggtgagttttgccacc
gcatatgacttcctgtatgatcatttgaacaagtctcgacaggaaagatatgtggaggtt
atagctgatgcctctcgatatatgtatgaaatgtcttacagccgtggatggggatttcag
tacctgcacaatcatcaacccaccaactgtgtggccttgttgacgggaagccttattctt
atgactcaaggttacctccaagaagcttatctgtggacaaagcaggtccttgccattctg
gaaaagtcaatggttctgttgcaggatgttaaggatggctcactgtatgaaggagtggct
tacggcagttacaccaccagatccctgttccagtacatgttcctagtacagaaacatttc
aacatcagccacttcgaccatccatggatcaagcagcactttgccttttactacaggacc
gtgctcccaggttttcaaaggactgtggccattgccgactcaaactacaactggttctat
gggcctgagagccagcttgtgtttctggatacttacatcatgcgcaatggtagcggcaac
tggctggcacaacagatcagaaagaatcggattcgggaaggaccaggcacaccaaccaaa
ggacagagatggtgcactctccatattgaatttctttggtatgatgctactttaacacca
gtgccacctcgagattatgggttgtcaaaattgcattactttgaagactggggagttgta
acttatggaggagccgtgccaacagaaatcaaccggcctttcctctccttcaaatctggt
aaactgggcggacgtgcaatatttgacattgttcatcagaataaatattcccagtggatt
acaggttggaagaatttcaatgccggccatgaacatccggatcagaattctttcacgttt
gcgccgaatggggttcctttcatcacggaagctttgtatggaccgaagtatacttatctc
aacaacgctttaaccttttctccagccacctcagagtcttgctttcccccttgggaggga
caggtgacggaagcctgtaactcaaagtggttgaaatacaaacatgggatttctggaaat
agccacggacacattgttgcagctttggagcaaaatggggtggtctttatcagaggagag
gcagtgggggcctacagcccgagcctgaagctgaagagctcccaaaggagtcttctgctt
ctgcatccacagcttctgctcctagtggatcaaatccatttagaagaggacagccccctt
cagaaaatgagtgcctttttccataacacagatgtagggtttcaggcgacgtccaaagat
ggaatacatggagcatttgttcaacagaaggatggccaatatagaatgttttggatggat
gatcaaggcaacagtgagaagggcatgctgtcatacaaggtgtatcctcgtggctatcca
tacaacggaacatattatgtgaacgttacaaccacgttgaggtacccaatcaccagaaca
gcctacatcttctttgggccttctgtagagattcaaagctttaccattcgggaggatttg
gatcgagtagatttatatatagcaacaaatgataaaacctacacagtttatctaataact
ggggagactcctatgaaaccactgtttgccatggtactaactgaccgtcagaagatcgtg
tttgatagaggctctgcagtcaggactgattcactgaaggaggtggaaaactatgtgaat
gttgttgaggaaaatcttcagcacgcaaagccagtctttcagcagctggaaaagcatatt
ctggctcgtgtattcaataccgacaacttcagaaagaccgctgagcgtctcctgaaactg
tctggcaaaaagaagacagaggaagccattgagaaattattttctatctccagggcacaa
agtaaggcgaaaaaaaccagaaaaggaaaaagcgaaggcgataagttttctaacaacctt
ccggatatttttgcacaaattgaaatgaatgaaaagagagaacggaagaagcttgtggag
caactgaaagaagaatctgattccaatgagaggaacgaggatgtaagggaattctttgac
tttaaggaccttccttatgtgaaaccagaaaaggccataaacaataaggttgcaagaaat
cgatatgtcaatccaagagccactattcgaagcactgcacagtccctttcagcttcctat
acgcgactctttttaatattaaatattgcaacattcttcttcctgttagcattgcagctc
attcggttccagaaagccccaagcctgcacgcccaaagatttctctatgcaatactttta
ctggactgctttgtactactttgcttgtactcatcttgttctcaagcacaatgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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