KEGG   Callorhinchus milii (elephant shark): 103183009
Entry
103183009         CDS       T03088                                 
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04020  Calcium signaling pathway
cmk04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    103183009 (grin1a)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    103183009 (grin1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cmk04040]
    103183009 (grin1a)
Ion channels [BR:cmk04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   103183009 (grin1a)
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 DUF6724
Other DBs
NCBI-GeneID: 103183009
NCBI-ProteinID: XP_042193498
Position
Unknown
AA seq 949 aa
MGGYPWLWVLLLSGWSRLPAPAGASPKIVNIGAVLSTKKTEGIFKEAVAQANRKYGTWKI
QLNATAVTHKPNAIQMALSVCEDLISSQVYAILVSHPPGQNDQLTPTPVSYTAGFYRIPV
IGLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFEMMRIFKWGHIILIVSNDHEGRAAQK
KLETLLEERESKNKKRNFEKTDQHSYDSRRGPKAEKVLQFEPGTANMTSILMEARELEAR
VIVLSANEDDAVTMYKTATILNMTGPGYVWLVGEREISGRAMQHVPEGVIGLQLINGKNE
SAHINDAVGIVAQSIHELFVKENITDPPRGCVGNTNIWKTGPLFKRVLLSSKYPNGFTGQ
VEFNDEGDRKFSNYSIVNVQKGKLVTIGVYNGTKILVNDKKIIWPGGELNAPRGFQMSTR
LKIVSIHQEPFVYVKPTMPDGTCKEEFMMNGEIIKKVICIGPNATVTGPLAGRPIIPQCC
YGFCVDLLVKLASTTTLNFTYEVHLVHDGKFGTQERVNNSNKKEWNGMMGELLGGHADMI
VAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVV
AVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILG
MVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYF
RRQVELSTMYRHMEKHNYESAAEAIQAVRDGKLHAFIWDSAVLEFEASQKCDLVTTGELF
FRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKNWVRYQECDFRSNAPATLTFENM
AGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKNGRAEPD
PKTKASFRSLTSTLTSSFKRRRSSKDTQYHPTDISGQLNLSDPSVSTVV
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggggggctacccttggctgtgggtcctcctcctgtccggctggtcccggctcccagcc
ccggcgggcgcttcgcccaaaatcgtcaacatcggggcggttttgagcaccaagaagacc
gagggcatcttcaaggaagccgtggctcaagccaaccgcaagtacggcacctggaagatc
cagctgaacgccactgctgtcacccacaagcccaacgccatccagatggctctgtctgtc
tgtgaagatctcatcagtagccaggtctatgcaatattagtgagtcatccgcctgggcag
aatgaccaattgactccgacgcctgtgtcttacaccgctggcttctaccggatccctgta
attggtctgacaacaaggatgtccatctattctgacaagagtatccacctctccttcctc
cgcaccgtcccaccgtactcccaccaggcgcaggtttggttcgaaatgatgcgaatcttc
aaatggggccacattatcctgatcgtcagcaacgaccacgaggggcgggcagcgcagaag
aagctggagacgctgctggaggagagggagtcaaagaataaaaaaaggaactttgaaaag
accgatcaacattcgtatgacagcaggcgaggaccaaaggctgagaaagttctgcagttt
gaacctgggaccgcaaacatgacttcaatactgatggaagccagagaactggaggcacga
gtgatcgttctgtcagccaatgaagacgacgctgtgacgatgtacaagacagcaacgatc
ctcaacatgacggggcctggctacgtctggcttgtgggagagagagaaatatcagggagg
gccatgcagcatgtccccgaaggggtgatcgggctgcagctcatcaatgggaagaacgag
tcggctcacatcaacgatgcagtgggcattgtggcccaatccatccatgagctctttgtg
aaagaaaacatcaccgaccctcccagaggctgcgtgggcaacactaacatctggaaaacc
gggcccctcttcaaaagggtcctgctgtcctccaagtatcccaatgggttcacaggccaa
gtggagttcaatgatgaaggagatcggaagttttccaactacagcatcgtgaacgtgcag
aaagggaagctggtgacaatcggagtttataatggcacaaagattctggtgaatgataag
aagataatctggccaggcggggaactcaacgcacccaggggctttcagatgtcaactaga
ttaaagatcgtcagcattcatcaagagccctttgtgtatgtcaagccgacaatgccggat
gggacttgtaaagaagaattcatgatgaacggagagatcattaaaaaggtgatctgtatt
ggacccaatgccacagtgaccggtccattagcaggtcgccccattatccctcaatgttgc
tatgggttttgtgttgatttgctcgtcaaacttgccagcactaccacactcaactttacc
tacgaggttcatcttgtccatgatggaaagtttgggacgcaagaacgggtgaataacagc
aataagaaggagtggaatgggatgatgggagagctgctgggaggacatgctgacatgatc
gttgctcctctaactatcaacaatgaacgagctcagtatatcgaattctccaagcctttc
aaataccagggactcaccattctagtgaaaaaggaaattccccggagcaccttggactcg
ttcatgcagccttttcagagtacgctctggctcctggtcggtctctctgtgcacgtggtg
gcagtgatgttgtatctgctggacaggttcagtcctttcgggcgttttaaagtgaacagt
gaagaagaggaagaagatgcattgactctgtcttcagccatgtggttctcttggggggtg
ctgctgaattccggaatcggagaaggggctccgaggagtttttctgcccgtatcctgggc
atggtgtgggctggctttgctatgattattgtggcctcatacactgctaacctggccgct
ttcctggtgctggacagacctgaagagcgcatcacaggaatcaacgaccccaggcttcga
aatccctcggataaattcatctatgccacagtgaagcagagctctgtggatatctacttc
cgtcggcaggtggagctgagcaccatgtaccgacacatggagaagcacaactacgagagt
gcggctgaggctatccaggctgtgcgcgatgggaaactgcacgcgtttatctgggactcg
gcggtgctggagtttgaggcatcgcagaagtgtgacctggtgaccacaggcgagctgttc
ttccgatcaggttttgggattggaatgaggaaggacagtccatggaagcaggctgtgtcg
cttgctatactgagtttccatgagaacggttttatggaagacttggataagaactgggtc
agataccaggagtgtgacttccgcagcaatgccccagcaactctcacatttgagaacatg
gcaggtgtcttcatgttggtggctggaggaatagttgcaggaatattcctaatattcata
gagatcgcttacaagcgccacaaagacgcccggaggaaacagatgcagctcgcctttgct
gccgtcaacgtctggagaaagaacttgcaggatagaaaaaatggtagagcagagcctgac
cctaaaacgaaagcatcttttagatcgctcacttcaacactgacctccagcttcaagaga
cgtaggtcttccaaagacacgcagtatcaccctactgatataagtgggcagctgaacctt
tcagacccttcggttagcacagtggtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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