KEGG   Callorhinchus milii (elephant shark): 103183843
Entry
103183843         CDS       T03088                                 
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
  KO
K11840  ubiquitin carboxyl-terminal hydrolase 9/24 [EC:3.4.19.12]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cmk01002]
    103183843 (usp9)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmk04121]
    103183843 (usp9)
Enzymes [BR:cmk01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103183843 (usp9)
Peptidases and inhibitors [BR:cmk01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103183843 (usp9)
Ubiquitin system [BR:cmk04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103183843 (usp9)
SSDB
Motif
Pfam: DUF3517 UCH UCH_1 FAST_1
Other DBs
NCBI-GeneID: 103183843
NCBI-ProteinID: XP_042190340
Position
Unknown
AA seq 2526 aa
MTATTRGSPVGGNDNQGQAPDGQSQPPLPQNQTSSPNTSSENSPVSPPDEQGQGDAPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKSLDIKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
YVSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFVEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHSLVTLVAENLSAYMENIRQFHKENPEYDPQTVQPSSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWFSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLEYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPRLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHVSLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVEGCLPGVIMSLHPRYISF
LWQVADLGSSLNMPQLRDGARILMKLMPPDNTTVEKLRAICLDHAKLGESSLSPTLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGVSLVLGMLTRNNFLLNAD
VETRRAAYLNALKIAKVLLTAVGYGHVRAVAEAFQPVVEGSSTVSPINHATHSQAVVLQN
ALHNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSIQLVFSS
SEDISKIYEKTNAGKEPDSEDEHVCCEALEVMTLCFALVPTALDTLSKEKAWQTFIIDLL
LHCHSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLASTARERAKHSADYFTLLR
HLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVTKELLAF
QTPEKKYHIGSEKGGANLIKELIDDFIFPASNVYLQYKKSGELPSEQAIPVCSTPATINA
GFELLVALTVGCVQNLKQIVDTLTDMYYAGCEALTEWEYLPPVGPRPSKGFVGLKNAGAT
CYMNSVIQQLYMIPAIRNGILTTEGTGSDVDDDTSGDEKQDNESNIDPRDDVFSYHHHYD
KPVIGKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDA
LEFFNSLVDSLDEALKALGQPTMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN
HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWER
ECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDINPENQVIQNDQPDNEQPGSTKYRLVG
VLVHSGQASGGHYYSYIIQRNGGDGEKNKWYKFDDGDVTECKMDDDEEMKNQCFGGEYMG
EVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDTELVKYISELEITIKPHQIKMPSVI
ERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNSVYLNPPPGQDQLLPEAEELAMISIQL
AARFLFNTGFHTKKIVRGPASEWYDALCILLRHSKNVRYWFAHNVLFAHPNRFSEYLLEC
PSTEVRSAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVLNLLRRE
VSEHGRHLTQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQYAELGK
LYAVVSQLVRCCDVSSRMQTSINGNPPLSNPYGDPNLSQPIMTIQQSVADILFVRTSYVK
KIIEDCSNSEETIKLLRFCCWEIPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIE
DSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQS
NGDLKRKWTWAVEWLGDELERRPYAGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTL
AKACELCPEEGTSQVISATETLASSLIGVSQEPDEQEAPDDHDSSPPEDAPLYPHSPSSQ
YQQTTK
NT seq 7581 nt   +upstreamnt  +downstreamnt
atgacagccacgactcgtggctctcctgtcggggggaatgacaaccagggacaggctcct
gatggacagtctcagcctcccctcccacagaatcagacttcctctcccaacacatcgagt
gagaattcaccagtgagccctcctgatgaacaaggtcagggtgatgctcctcctcagctt
gaggaggaggagcctgcatttcctcacactgatttggcaaagctggatgatatgataaat
agaccccgttgggtggttccagttttgcccaaaggtgaattagaagttcttctagaagct
gctatagatcttagtaaaaaaagccttgatattaagagtgaagcatgtcaacgctttttc
cgtgatgggctcacaatttcctttacaaaaattctaacagacgaggctgtgagtggttgg
aaatttgagatccatcgatgtattataaacaatactcatcgcctcatagaactgtgtgtg
gccaagctatcccaggactggtttccccttcttgaactccttgctatggccttaaatcct
cactgcaagtttcatatctacaatggtacacgtccctctgagactgttcctgctggagtc
cagctggctgaggatgaactctttgcacgtcctcctgacccacgctcacccaagggctgg
cttgtggatcttatcaacaaattcgggacattaaatggttttcagattctacatgatcga
tatgtcagtggttcagcattgaatgttcagataattgcagctctcatcaaaccatttgga
cagtgttacgaattccttaccctacatacggtgaagaaatatttccttccaataatagaa
atggttccccagtttcttgaaaatctaacagatgaggagctgaaaaaggaagcaaagaat
gaagccaaaaatgatgctttatccatgataatcaaatcattgaaaaacttagcttctcgg
gttcctggacaggaggaaactgtcaaaaatttagaaatatttagattaaaaatgatactg
aggttattacaaatctcatcttttaacggaaaaatgaatgcactaaatgaagttaacaag
gtgatttccagtgtctcttattatacacatcgccatggcagtcctgaagaagaagaatgg
ttgacagcagagagaatggcagagtggatccaacagaataatatcttgtcaattgtactg
cgtgacagtctgcatcaaccacaatatgtggaaaaactagagaagatacttcgctttgtt
attaaagaaaaagcactcaccctccaggatctcgacaacatttgggcagcgcaggctggt
aaacatgaggcaattgtgaagaatgtccatgatcttcttgcaaaattggcttgggatttt
tctcctgaacaactagaccacctctttgattgctttaaggcaagttggacaaatgcaagt
aaaaagcaacgtgaaaagttgttggaactcatccgtcgccttgctgaagatgacaaagac
ggtgtgatggcacataaagtgttaaacctcctgtggaatttagcacacagtgatgacgtg
cctgttgatattatggatcaggctcttagtgcacacatcaaaatcctggattacagctgt
tcacaggatcgcgacacacaaaagatacagtggatagatcgttttgtggaggagttgcgt
actaatgacaagtgggtaattcccgcactgaaacagattagagaaatctgcagtttattt
ggagaagcaccgcagaatttgagtcagacgcaacgaagtcctcatgtgttctatcgtcac
gacttgattaaccagcttcagcataatcattcgctggtcactttggtagctgaaaacctc
tcagcatacatggagaatatacggcagtttcacaaagagaacccagaatatgatccacag
acggtgcagccaagtagtcgatacagccatgtacaagaagttcaagaacgacttaatttc
ttgagatttttattgaaggatggccaactgtggttgtgtgctcctcaagccaagcagatc
tggaagtgtttggcggaaaacgcagtctatctttgtgatcgtgaagcttgtttcaagtgg
ttttccaagttgatgggagatgaacctgatttggacccagacataaataaggacttcttt
gaaaataatgttctgcaactggatccttccctcctaacagaaaatggaatgaagtgcttt
gagcgatttttcaaggctgtaaactgtcgagaaggaaagcttgtagccaagcgacgtgct
tatatgatggatgacctcgaattgataggactggagtatctgtggagggtcgtaattcaa
ggaagtgatgacattgccagtcgagctatcgacctgttaaaagaaatatacaccaatctt
ggaccaaggttgcaggttaatcaggtagagattcatgaagacttcattcagtcatgtttt
gatcgactgaaggcctcgtatgacacattgtgtgtacttgatggtgacaaagacagtatt
aattgtgcaagacaagaagcaatacggatggtgcgtgtattgactgtgttgcgggagtac
atcaatgagtgtgacagcgactaccatgaggagcgaactattctacccatgtctagagca
tttcgtggaaaacatgtctcacttgtagtacgttttccgaatcaaggacgtcaggttgag
gatttggatatttggtcacacacaaatgataccattggctcagtcaggcgttgtatcctc
aatcgaataaaagccaacagcgcgcacacaaaaatagaattgtttattggtggtgaactt
gtagaccctgctgatgatcgaaaattaattggacagttgaatctgaaagataaaacactt
attacagccaagctaacacagataagctccaatatgccttcaagccctgatagttcttct
gattcctcaactggctcccctggaaaccatggtaaccactacagcgatggccctaatcca
gaagtagaaggctgtttgcctggagtgataatgtccttgcaccctagatacatttccttc
ctttggcaagttgcagatctgggcagcagcctaaacatgccacagttgagagatggtgct
cgtatccttatgaaacttatgcctcctgataacactacagtagaaaaactgcgtgctatc
tgcttagatcacgcgaagcttggtgaaagcagcctcagtccaactcttgattccctcttt
tttggaccatctgcctcacaagtgctgtatctaactgaggtagtatatgccttgttaatg
cctgccagtgcacctctgggggaagacgcaagtgattttcagtacaattttttaaaaagt
ggtggtgtgtccctcgtgctgggaatgctcaccaggaataatttcctcctaaatgcggat
gtggagactcgcagggctgcctatcttaatgcactaaaaatagccaaagtattactcacg
gcagttggatatggccatgtcagagctgtagccgaagcctttcagccagttgtggagggt
tcaagcactgtttcaccgataaatcatgctactcatagccaggctgtagttctgcagaat
gctctgcacaacattcccaatcccacttcagaatgtatgttgcgaaatgtagctattcgc
cttgcacagcaaatatcagatgaggcctcaaaatatatcccagacatctgtgttatccga
gcagttcaaaaaattgtctgggcctcgggttgcggttcgatacagcttgtattcagttca
agtgaagatatcagcaagatttatgaaaagactaatgcagggaaggagccagattcagaa
gatgaacatgtttgctgtgaagcactggaagtcatgacgctttgttttgcactggttcca
acagcgctggatacacttagtaaagaaaaggcatggcaaaccttcatcattgatttgcta
ctgcactgccacagcaaagctgtaaggcaaatggcccaggagcagttcttcctgatggct
accagatgctgcatgggacatcgacctctccttttcttcattactctgctcttcactgta
ttggcaagcacagcaagagagagagcaaaacattcagcagactacttcacgttattgaga
catttgcttaattacgcctataatagcaacatcaacttaccgaatgcagaagttctgctc
aacaatgaaattgattggctgaagaggattcgggatgaagtaaaaagaacaagtgaaacg
ggtgtcgaagaaaccatcctggagggtcatcttggagtcacaaaggagctgctggctttc
cagacacctgaaaagaaatatcatataggttctgaaaaaggaggagctaatctcattaag
gagctgatagatgattttatcttcccagcctccaatgtgtatctacagtataagaagagt
ggggagttgccatctgagcaggccattcctgtttgtagtacgccagctaccatcaatgct
ggttttgagctgctggtagcgttaactgttggctgtgtgcaaaacctaaaacaaatcgtt
gacactctgacagatatgtattatgcaggttgtgaagcattaacagagtgggagtacttg
ccaccagtcggaccacggccttcaaaaggatttgtaggattaaagaatgctggtgcaact
tgctacatgaattctgttatccagcaactgtacatgataccagctatcagaaatggtata
cttactactgaaggcactggcagtgatgttgatgatgatacatctggtgatgagaaacaa
gataatgagagcaacatagatcccagagatgatgtttttagttaccatcaccattatgac
aaacctgtaataggaaaaactgaagatcggaaagagtataatattggcgtcctcaggcac
cttcaagtcatctttggacatttggctgcctccagattacagtactatgtgcctagaggt
ttctggaagcagttcaggctttggggtgaaccagttaaccttagagaacaacatgatgct
ttagaattcttcaactctcttgtggacagcttggatgaagctttgaaagctcttggacaa
cctactatgctaagcaaagttcttgggggttcatttgctgatcagaagatatgtcaaggc
tgtcctcataggtatgagtgtgaagaatccttcacaacgttgaatgtagacattagaaac
catcaaaacctgcttgactcacttgaacaatatgtgaaaggagacttgttggagggcgcc
aatgcataccactgtgagaaatgcaacaaaaaggtggacacagtaaagcgtttgctaata
aagaagctgccaccagttttagcaattcaactgaaacgatttgactatgactgggaaagg
gaatgtgcaatcaaattcaatgattattttgagtttccacgggagctggatatggagcct
tatacagttgcaggtgttgccaagttggaaggggatgatatcaatccagaaaatcaggtg
atccaaaatgaccagccagataatgaacagcctggtagcacgaaatacagactagttggt
gtcttggtgcacagtgggcaagccagcggtggacattactattcttacatcattcagaga
aatggtggagatggtgagaagaacaaatggtataagtttgatgatggtgatgtaactgag
tgcaaaatggatgacgacgaggagatgaaaaaccagtgttttggtggagaatatatgggt
gaagtcttcgaccatatgatgaaacgtatgtcatacaggcgacaaaaacgatggtggaat
gcctatatacttttctatgaacgtatggatacaatagataaagatactgagttagttaaa
tacatttccgagctggagattaccattaaaccacaccagataaagatgccaagcgtcata
gagcgaagtgttcggaagcagaatgtacaattcatgcacaaccgaatgcagtatagcctg
gagtacttccagtttatgaagaaactactgacctgtaacagtgtctacctgaatccacca
cctgggcaagatcagctgttgcctgaagctgaagaactggctatgataagtattcaactt
gcggcaaggttcttgttcaatacagggtttcatacaaagaaaattgtccgtggtccagca
agcgaatggtatgatgcattgtgtatcctgctccgccacagcaagaatgtacgctattgg
tttgcacataatgttctttttgcccacccaaatcgcttctctgagtaccttctggagtgc
cctagtacagaagtgaggagtgcttttgctaagctcattgtatttattgcacatttctct
ttgcaagatggaccatgcccttccccctttgcctccccaggaccttccagtcaggcttat
gataatttaagtctcagtgatcatcttcttagagctgttctaaatctactgagacgagag
gtatctgagcatggaaggcacttgacacagtacttcaacctttttgttatgtacgccaat
ctgggggtggctgaaaagacacaattgctaaaactgaatgtgcctgcaacatttatgctt
gttgctttggatgaaggcccaggtcctcctattaaataccagtatgctgaacttggcaag
ctttatgctgtggtgtcacagttagttcgttgctgtgatgtatcatcacgcatgcaaact
tcaattaatggaaatccgcccctgtcaaacccctacggtgatcctaacctgtcccagcct
ataatgactatccagcagagtgtggcagacatcctgtttgtacgaactagttatgtgaaa
aagattattgaagactgcagcaattctgaggagaccatcaaactacttcgcttctgctgc
tgggagattccacagttttcttccactgttctgagtgaactcctctggcaggtggcatat
tcttatacttatgagcttagaccctacttagatcttctgctgcaaattttgctaatagag
gattcttggcaaacccacaggattcataatgccttaaaggggattcctgatgacagggat
gggctgtttgacaccattcagcgttctaaaaaccactatcagaagagagcgtatcagtgt
attaaatgcatggtagccctcttcagttcctgtcctgtagcctaccagatcctccagagt
aatggagacctgaaaaggaaatggacgtgggcagtagagtggcttggagatgagctggaa
cgtcggccgtatgctggaaatccacaatatacgtacaacaactggtcaccccctgtacag
agcaatgaaacatcaaatggttacttcctggaacggtcacacagtgccaggatgacactt
gcaaaggcctgtgagctgtgccccgaagagggaacatctcaggtgatatcagccacagaa
acattggcaagcagcttaataggagtctcgcaggagccagatgagcaagaagcaccagat
gatcacgattcttcccctccagaagatgccccattatacccccattcacccagctcccag
tatcaacagaccaccaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (80)   

Download RDF
DBGET integrated database retrieval system