KEGG   Callorhinchus milii (elephant shark): 103184790
Entry
103184790         CDS       T03088                                 
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmk03016]
    103184790 (gtpbp3)
Transfer RNA biogenesis [BR:cmk03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    103184790 (gtpbp3)
 Prokaryotic type
   Methyltransferases
    103184790 (gtpbp3)
SSDB
Motif
Pfam: MnmE_helical TrmE_N ADH_zinc_N MMR_HSR1 ADH_N FeoB_N RsgA_GTPase ADH_zinc_N_2 Dynamin_N DO-GTPase2 Arf SRPRB FtsK_SpoIIIE ABC_tran MCM
Other DBs
NCBI-GeneID: 103184790
NCBI-ProteinID: XP_007901172
Position
Unknown
AA seq 840 aa
MSWVRFGAAPERILRAALRKNHSLRHQLRLAALGTSHATRSGNSYHAALCTELNKPLVVQ
QLPSAVLKPTEVRVDIHCCGVNFADILVCQGLYQERWPTPFTPGMEFAGCVVEIGTSVTT
VQKGERVVGVSFKGAMAEECIIDQKMLWPIGAELPYEVAASIPVSYGTAILALEHRAHTQ
PGETVLVTAAAGAAGLAAVDIASHVLNAQVIAAVGSDEKCDLAVQRGAIAAINYTTQSLK
EEVKRLTANKGVNVVFDAVGGDIFKEALSSLSWEGRILVVGFAGGKIPSVPANLLLLKNI
AVKGVYWGKYGQRCFPVFSRSIGSAIQYAQEGRTKPLIGAIYKMQQPCFQVRCMRTWCSG
AQETHTIFALSSGHGRCGVAVIRVSGPASATALSRLTGQRLLPPARAAVLRPIVDPVSGE
RLDTGLVLWFPGPHSFTGEDCCEFHIHGGSAVISGVLNALGQLPCLHPAEAGEFTKRAFL
NGKLDLTEVEGLGDLIQAETEAQRRQALRQMAGDLGQLYGRWSQRLIRCLAHVEAYIDFS
EDDNIEEGILTVVDNDVNLLQTEIDGHLRDSRQGERLRNGVHVVIAGATNAGKSSLLNII
CQKPAAIVSPIAGTTRDIVETALNIGGYPILLSDTAGLRESTDIIEQEGMRRARERLRQA
DIVVAVVDATTLPSDQTDATHFLQDYLNEMILEGSDVQQVESNLRERGWILVCNKSDLTQ
APDLNRLQAALTEHGLPQLCPLSCKTGNGFEHFLCVLSEKVEKMCGNPLVGNPSLTQTRH
RLHLRKCSEDLAQYHGYRELDVVLAAEQLRMALRQLGKITGKIGAEEILDVIFRDFCVGK
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgtcttgggttcggttcggcgctgccccagagcggatcctgagggccgcgctcaggaag
aatcattcattgaggcaccagctaagactggcagccttgggtaccagccatgcaacacgt
tcaggcaattcctaccatgcagcattatgtacagagctgaacaaacctttggtcgttcaa
caactgccttcagctgtgctgaaacccactgaggtgcgagtggacattcattgctgtggt
gtgaactttgctgacattctggtatgtcagggcctgtatcaggagagatggccgaccccc
ttcactccaggaatggagtttgccggatgtgtggtggagattggaacaagtgtcacaact
gttcaaaagggagaacgtgtggtcggtgtgagctttaaaggagcgatggcagaagaatgc
atcattgaccagaagatgctgtggcccatcggggcagagcttccctatgaagtggccgct
tcaatacctgtatcgtacggcacggctattttggcacttgagcaccgagcacacacacag
ccgggggagacggttctggtgacggcagcagctggtgcagcaggacttgcagctgtggac
attgcttcacacgttctaaatgcccaggtcattgcagctgtggggagtgatgagaagtgt
gacttggctgtgcagcgaggggccatcgcagccatcaactataccacccagagtctgaaa
gaggaggtgaaaaggctgactgcaaataaaggggtgaatgtggtctttgacgccgtagga
ggagacattttcaaagaagctctcagcagcctatcttgggaaggcagaattctcgtggtt
gggtttgctggtggtaaaataccctctgtgcctgccaacctactgcttctgaagaatatt
gcagttaagggcgtctactggggcaagtacggccagcgatgtttcccggtcttctccagg
tccatcgggtcagcgatccaatatgctcaggaagggagaaccaagcctttgattggagcc
atctataagatgcaacagccttgttttcaggtccgctgcatgaggacatggtgttcaggc
gcccaagagacccacacgatttttgccctgagctcaggtcatggccggtgtggggtcgct
gtgatccgagttagtggccctgccagtgctactgcactgagccgcctgactggccagagg
ctactgcccccagccagagctgctgtgctccggccaattgtggaccccgtctctggggag
cgcttggacacggggctggttctctggttcccaggtccacacagtttcaccggagaggat
tgctgtgagtttcatattcatggcggatcagctgtgatcagtggagttctgaatgctctg
ggacagttaccctgtctgcatccagctgaagcaggtgaattcacaaagcgtgctttcctg
aacgggaagttggacctgaccgaggtggagggcttgggggacctcatacaagctgagacc
gaagcccagaggagacaagccttgagacagatggctggagatctgggtcaactctatggt
cgctggagtcagagactaattcgatgcctggctcatgtggaagcttatattgatttcagt
gaagatgataacatcgaagagggaatccttaccgtagttgacaatgatgtgaacttattg
cagacagaaattgatggccacttacgtgacagccgtcaaggtgaaaggctccggaatggg
gtccacgttgtgattgctggggccactaatgctgggaagagcagtcttttaaatataatc
tgtcagaaacccgctgctatagtgtcgcccatagcagggaccacacgggatattgtggaa
acagctctgaacattggaggatatcctattcttttgagcgatacagcggggctccgagag
agtactgatatcattgaacaagagggcatgaggcgggcacgggaaaggcttcggcaggca
gatatagttgtggcggtggttgatgccacgacgctcccatcagaccagactgatgcaacc
cactttctccaagactatctgaatgaaatgatcctggagggatccgatgtacaacaggtg
gaatccaatctgagagagaggggctggatcctggtttgtaacaagagtgatctcacacag
gccccagacttgaaccggttgcaggcggctctcacagagcatggcctgcctcagttgtgc
ccactctcgtgcaaaactgggaatggttttgaacattttctgtgtgtcctcagcgaaaaa
gttgaaaaaatgtgtggaaatccgttggtcggtaatccaagcctaacccaaacccgtcac
aggcttcatctccggaaatgttctgaggacttagcacagtatcatggataccgggagctg
gatgttgtcctggcggctgagcagctgaggatggcattgagacaactgggaaaaatcacc
gggaagatcggagcagaagaaatccttgacgtcatattcagggacttctgtgttgggaag
taa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (58)   

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