KEGG   Callorhinchus milii (elephant shark): 103185032
Entry
103185032         CDS       T03088                                 
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
  KO
K05660  ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    103185032
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cmk02000]
    103185032
Transporters [BR:cmk02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    103185032
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_22 Zeta_toxin ABC_ATPase Rad17 AAA_16 RsgA_GTPase AAA_30 DUF815 MeaB G-alpha ECH_2
Other DBs
NCBI-GeneID: 103185032
NCBI-ProteinID: XP_007901543
UniProt: V9K8U9
Position
Unknown
AA seq 1274 aa
MQLEDSAVGTFDSQIDKSKEIEDLTEDNGKRKDKKEEPEKVPMVSPLKLFHFADAVDIML
MVIGLIAAVIHGMCLPLLCVVYGDMTNGFISEAPSNTSSNETNSGNLSFVKQMAQFSYYY
LGIAGIALICGYIQVSFWVLTSARQTRRLRKAFFHSVLGKEISWFDLSPTGQLNTRLTAD
INKINEGIGDKIGLLFQYLTSFVGGVIIGFIKGWKLTLVMLAAGPALALSAMVWAKLTVS
FTNLEMTAYAKAGAVAEEVLSSIRTVVAFGGQDKEIERYRKNLREAKKIGVKKSITINLS
VGFAYFLLFGSYALGFWYGTILILGNTGYDIGTVLTIFFAIIFGTFSIGQTAPYFEAFSD
ARGAAFEIYKILDEKSAMDSFSEEGYKPEYIKGTVEFKDVYFNYPSRPDVEILRGINLKV
ESGQTLALVGSSGCGKSTTVQLLQRFYDPLQGMITIDGHDIRSLNIRHFRRFIGVVSQEP
VLFATSIAENIRYGDEDVTDEEIEKAAKEANAYDFIVKLPEAFHTLVGQRGTQLSGGQKQ
RIAIARALVRNPKILLLDEATSALDTESEVIVQSALDKASKGRTTIVIAHRLSTIRTADK
IASFQNGVLMEEGTHAELMQKNGVYHSLVTAQAFKNTEETEAESATEIDVVDEPLRVRAY
SKNSSIKSISKLERDMSIEEMEEPKDEEKLADVSLLKLFKLNKSEWPYIAIGIIGATING
GIHPAFAVLFAKIITIFTGTDPDVIKKNADLYCILFFVIGIISFFTYFLQGYMFGKSGET
LTMKLRYMAFKAMLRQEIAWFDDDRNNTGALTTRLATDASQIQTAVGERMGLIAQNIATM
GGSTILSFIFGWQLTLVVLLIMPILVVAGMIEMKSLSGYAIRDRKELEAAGKVASEAVEN
IRTVVSLTRESAFEKMYDENLKKPFRNAQRKSQVYGLTFAFSQAIQYFSYAASFQFGAYL
ISINQMDIEAVFLVFNAIVYGAMAVGQSSSFAPDYAKAKTSAANLFALFERVPSIDSYST
DGQKLDKFNGDLELSNIVFRYESRPDVPILQGLSVKVGNAQTLALVGSSGCGKSTSVQLI
ERFYEPLEGQVLLDGNDIRNLNIQWLRSQIGIVSQEPVLFNCTIAENIAYGDNSRTVSQE
EIEAAAKAANIHSFVQQLPNKYSTYVGNRGTQLSGGQKQRVAIARALIRQPKILLLDEAT
SALDTESEKIVQEALDQAREGRTCVVIAHRLTTVQNADVITVINNGKVLESGTHEQLMAK
RKAYYNLVNAQVIQ
NT seq 3825 nt   +upstreamnt  +downstreamnt
atgcaactagaagattcagctgtgggaacatttgattctcagatagataaatctaaggag
atagaagatctgacagaggataatggaaaaaggaaagataaaaaggaagagcctgaaaaa
gttcctatggtcagccccttaaagttgttccattttgcagacgcagtggacattatgttg
atggtgataggactgatagccgcagtaattcacgggatgtgccttccactcttgtgtgtt
gtatatggtgacatgaccaatggctttatatctgaggcaccttcaaacacctcatcaaat
gagacaaacagtggcaatctctcttttgtcaaacaaatggcacagttttcctattactat
cttggaattgctgggatagccctgatttgtggttacattcaagtttccttctgggtcctg
acttcagcaagacaaacaagaagactccgaaaggcattttttcactcagtgcttggaaaa
gaaataagttggtttgaccttagtccaacaggccaactcaacactcgtctcacagctgac
atcaacaagattaatgaaggaattggtgacaagattggacttttgtttcagtatctcaca
tcgttcgtaggaggtgtaataattggtttcataaagggatggaagctcacattggtcatg
ttagctgctggtccagccctcgcattatctgctatggtgtgggctaagctcacagtctca
ttcaccaatttggagatgacagcctacgcaaaagctggggcagttgctgaagaagtgtta
tcatcaattcgaactgtggttgcctttggaggacaagacaaagaaattgaaaggtaccgt
aaaaatttgcgagaggcaaaaaagataggagtaaagaagtcgatcactattaacctgtct
gttgggtttgcctattttttattattcggatcttatgcattgggattttggtatggaacc
attctgattcttgggaacactggatatgacattggaacagttctcactatttttttcgct
atcatctttgggaccttctctatcggccagactgcaccatatttcgaagcattttctgat
gccagaggagctgcctttgaaatttataaaatattggatgagaaatctgccatggatagt
ttttcagaagaagggtataagcccgaatacatcaaaggaacagtggaatttaaggatgta
tacttcaactatccatcacgaccagatgtggagattctgagaggtataaatctgaaggtt
gagagtggacaaacgttggctttggtgggaagcagtggttgtggaaaaagcactactgtt
caactgctgcagagattttacgatccccttcaaggaatgatcacaattgatggacatgat
atacggtcactaaacatcagacattttcgaaggttcattggtgtggtcagccaggagcct
gtgctgttcgctacaagcattgctgaaaacattcgttatggagatgaagatgtaacagat
gaagaaattgagaaagctgctaaagaagcaaatgcttatgattttattgtgaaacttccc
gaagcattccacacactcgttgggcaaagaggaacacagctgagtggaggtcagaaacaa
aggattgctatcgctcgtgctctagtgcgtaaccccaagattctcttgttagatgaggcc
acatctgccctggacactgagagtgaagttatagtccaaagtgcattagataaggccagt
aaaggacgaactacaattgtgattgctcaccgcttgtccacaatcaggactgcagataag
atagcaagctttcaaaatggtgttttaatggaagaagggacacatgcagaattgatgcag
aaaaatggagtttatcactcacttgtaacagcccaggcatttaaaaacacagaagaaaca
gaagctgaaagtgcaactgaaatcgatgtagttgatgaacctctccgagtaagggcctat
tccaagaattcaagtattaaaagcatttctaagctggagagggacatgtcgattgaagag
atggaggagccaaaggatgaagaaaagcttgcagacgtctcactgctaaaactttttaaa
ctgaataaatctgaatggccatacattgccataggaataataggtgcaacgatcaatgga
ggaattcacccagcctttgctgttttatttgcaaagatcattactatcttcactggtact
gatccagacgtgataaaaaaaaatgctgatctttattgtatcctgttctttgtcattggt
atcatttccttttttacatatttcttacaaggctatatgtttggaaaatctggggaaacc
ctcacaatgaaactgagatacatggccttcaaagccatgctacgtcaggaaattgcttgg
tttgatgatgacagaaacaacactggagccctgacaaccaggttggccacagatgcatct
caaattcaaacagcagtaggagaaagaatgggattaatagctcaaaatattgcaaccatg
ggaggttcaactattctctcattcatatttgggtggcagctgaccttggtggtcctgttg
atcatgcccatcctggttgtggcaggaatgattgaaatgaagtctctgagcggatatgca
attcgcgatagaaaagagcttgaagcagctggaaaggtcgcatcagaagcagtggaaaat
atccggaccgttgtttctttgaccagagaatctgcatttgaaaaaatgtatgatgaaaat
ctaaagaaaccatttagaaatgctcagagaaagtcccaggtatacggcctgacctttgca
ttcagccaggccatccagtatttcagctatgcagccagttttcagtttggtgcatacctc
atatcaatcaatcaaatggatatagaagctgttttccttgtgtttaatgccatcgtgtat
ggtgccatggcagtcggacaaagcagttcctttgctcctgactatgcaaaagcaaaaacc
tctgcagctaatctctttgcactatttgaacgtgtgccatccatagacagctacagcact
gatggccaaaagctggataagtttaatggtgatttggagttgtcgaacattgtcttcaga
tatgagagtcggccggatgtcccaatcctccagggtctttcagtcaaagttggaaatgca
caaacattagctctggttggcagcagtgggtgtggtaaaagcacctcagtgcaactcata
gaaaggttctatgagcccctggaaggacaagtgttattagatggaaatgatatcagaaac
ttgaacatccagtggcttcgatcacaaataggcattgtatcacaggagcctgtgctcttc
aactgcactatagctgagaatatcgcctatggtgacaacagcaggactgtgtcacaggag
gaaattgaagcagcagcaaaagcagcaaacattcactctttcgttcaacaactccccaat
aaatatagcacgtatgttgggaacagagggactcagctttccggtgggcagaaacagcga
gtagctattgctagagccctcatacgacagcccaaaattttgcttttagatgaggcaaca
tctgcacttgatacagagagtgaaaagattgttcaagaagctctggaccaagcaagggag
gggaggacatgcgtggtgatagctcatcgcctgacaacagtgcagaatgcagatgtcatc
actgttattaacaatggaaaagtattagaatcaggcacgcacgagcagctaatggcaaag
cgcaaagcttattataacctagtaaatgcacaggtcattcaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (76)   

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