KEGG   Callorhinchus milii (elephant shark): 103185378
Entry
103185378         CDS       T03088                                 
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03022  Basal transcription factors
cmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103185378 (mnat1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103185378 (mnat1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmk03021]
    103185378 (mnat1)
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103185378 (mnat1)
Transcription machinery [BR:cmk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103185378 (mnat1)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103185378 (mnat1)
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-RING_UBOX TRAF3_RING zf-C3HC4 zf-UDP zf-P11 zf-RING_2
Other DBs
NCBI-GeneID: 103185378
NCBI-ProteinID: XP_042194202
Position
Unknown
AA seq 310 aa
MDDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGSGNCQECNTPLRKSNFR
VQLFEDPTVDKEVEIRKKVLKVYNKREEDFPSLCEYNDFLEEVEDIVYNMTNNVDLENTK
RRMEQYQRDNKEVIYKNKIKLTREQDELEEALELERQENEQRRLRLLKEEQMQQLAKKKN
KQALLDELESSQLPASMLLAQHKDRTAQLESQLETQRQVKSVTFSTGIKMGQQISLQPPP
KIEEALYVYQPMQVETYGPKVPEFELLGRLGYLNHVRAATPQDLAGGYSSSLACYRALQD
AFSGLFWQPS
NT seq 933 nt   +upstreamnt  +downstreamnt
atggatgatgaccagggctgtccgaggtgtaagaccaccaaatatcgcaacccctcgctc
aaactgatggtcaatgtgtgcggccacacgctttgcgaaagttgtgtggaactgctgttt
gttcgaggctctggaaactgtcaggagtgtaacacaccactccgaaagagcaacttccga
gtgcagctctttgaggatccaacagtggacaaggaagtagagattcgcaagaaagtgctg
aaagtatacaacaaaagagaagaagactttcccagtctctgtgaatacaatgactttctt
gaagaggtggaggatattgtttataatatgaccaacaatgtggatttggagaatactaaa
agaagaatggaacaataccagagagacaacaaggaagttatttacaagaataagataaaa
ttgactcgggagcaagatgagctggaagaggccttagaacttgaacgtcaggagaatgag
caaagacggttgcgtttactaaaagaagaacaaatgcaacaattggcaaaaaagaagaat
aagcaggctctgttggatgagctggagagttctcaactgccagccagcatgcttttggct
cagcataaggaccggactgcacagttggaatcgcagttggaaacacaacgacaggtcaaa
tccgtcacgttctcaacaggcatcaaaatgggtcaacaaatatccttgcagccaccacca
aagatagaagaggcattatatgtttaccagccaatgcaagtggagacatatgggcctaaa
gttccagaatttgagctgctcgggaggcttgggtacctgaaccatgtacgtgctgctaca
ccgcaagatcttgctggaggctactcttcttcacttgcatgttaccgtgcgctacaagat
gcatttagtggtctcttctggcagcccagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (44)   

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